| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4846 |
|---|
| Symbol | |
|---|
| ID | 5154717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5086132 |
|---|
| End bp | 5087544 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640559644 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001240775 |
|---|
| Protein GI | 148256190 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.318443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CGCGTGAGCT CCGGATCAAC GCCTTCAACA TGATGGCGCC GAGCCACAAT
TGGGGCGGAC TGTGGTCGCA TCCGCGCGAC CGTTCGGTCG ACTACAACAC GCTGGACTAT
TGGGTCGACT ATGCCAGGAC GGCCGAGCGT GGCCTGCTCG ACGGCATCTT CCTCGCCGAC
GTCTTCGGCG TCTATGACGT GTACGGTAAC AGCCCCGACA CCGCGCTGGC GCAGGCGATC
CAGCTACCGA ACGCCGAGCC GACGCTGCTG GTGTCGGCGA TGGCGCTCGT CACCCGGCAT
CTCGGCTTCG GCATCACCGC GAACCTGACC TACGAGCACC CCTACCAGTT CGCGCGGCGC
TTCTCGACGC TCGATCATCT CAGCGGCGGC CGGATCGGCT GGAACATCGT GACCGGCTAT
CTCGACAGCG GCGCGCGTGG CATGGGCCTG CCGAACAACC GCGCCCATGA CGACCGCTAC
GATGCGGCGG ATGAGTTCCT CGCCGCTGTC TACAAGCTCT GGGAGGGCAG CTGGCAGCCC
GGCGCGGTGC GCCGCGACCG CGCCGCGGGC CTGTTCACCG ATTCATCGAA AGTGCACCGG
GTCCGGCATG ACGCCGCGCA TTTCAAGGTC GACGGCATCC ATCTCGCCGA GCCCTCGCCG
CAGCGCACGC CCCTGCTCTA CCAGGCCGGC ACGTCGACGC GCGGCCGCGC GTTCGCCGCC
CGGCATGCCG AGGCGATCTT CCTGAACGGC CAGACGCGGC CGGTGCTGGC GCGCGCCGTG
CGCGAGATCC GGGAGGCGGC AAAGGACGCC GGCCGCGATC CCTATGACAT CCGCCTGTTT
GCAGGCGCCA CCGTCATCGT GGCGCCGACG CGGGCCGAGG CGCATGACCT GCTCGCCGAC
TACGCAGCCT ATGTCGACCA GGCCGGACAG CTCGCGCTGC TCTCGGGCTG GGCCGGCATC
GATTTCTCGA CCTACAATCC GGACGATCCC ATCCGCTATG TCGAGAGCAA TGCCATCCAG
TCGATGGTCG AGAACTTTAC CGTGCGCAGC GAGCGTCCGG TCCGCATCGG CGACCTCGCC
GCCCTGAGCC GGGCCGGCGC GCGCTCGCCC TTCGTCGTCG GCTCACCGCA GGACGTCGCC
GACGAGCTGA TCGCCTGGGC CGACGAGACC GACGTCGACG GCTTCAACCT GTTCCGCCTG
GTGGCGCCGG AATCCCTCGA AGCCTTCGTC GATCTGGTGG TGCCGGAACT GCAGTCGCGC
GGCGTGTACA AGACGGCCTA TCGCGACAGC ACCTTGCGAG AAAAGCTATT CCCCGGCCGC
GGCCCCCTGC TGCACACGAC GCATCCCGGC GCCGGCTATC GCGATCCTGC AACCTTGCAG
TCCAGTCACC ACGCAAGAGA CGCGGCCGAG TGA
|
|---|
| Protein sequence | MTKPRELRIN AFNMMAPSHN WGGLWSHPRD RSVDYNTLDY WVDYARTAER GLLDGIFLAD
VFGVYDVYGN SPDTALAQAI QLPNAEPTLL VSAMALVTRH LGFGITANLT YEHPYQFARR
FSTLDHLSGG RIGWNIVTGY LDSGARGMGL PNNRAHDDRY DAADEFLAAV YKLWEGSWQP
GAVRRDRAAG LFTDSSKVHR VRHDAAHFKV DGIHLAEPSP QRTPLLYQAG TSTRGRAFAA
RHAEAIFLNG QTRPVLARAV REIREAAKDA GRDPYDIRLF AGATVIVAPT RAEAHDLLAD
YAAYVDQAGQ LALLSGWAGI DFSTYNPDDP IRYVESNAIQ SMVENFTVRS ERPVRIGDLA
ALSRAGARSP FVVGSPQDVA DELIAWADET DVDGFNLFRL VAPESLEAFV DLVVPELQSR
GVYKTAYRDS TLREKLFPGR GPLLHTTHPG AGYRDPATLQ SSHHARDAAE
|
|---|
| |