Gene BBta_4839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4839 
Symbol 
ID5154923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5079191 
End bp5080006 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID640559637 
Productputative methyltransferase 
Protein accessionYP_001240768 
Protein GI148256183 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.705578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACC CTATCGCCGT CATCAGCCTT CAACAGGACA CGCCGGAGCT CGCCCGCGCC 
TATGAGCAGC TCGGCGTCAT CCAGTTCAAC CATGGCAAGC TGCTGCTCGA ACCGCTGGCG
CTGAGATCCG GCGAGCGGGT GCTCGACGTC GGCACCGGAA CCGGCCGGCT TGCCGAATTC
GCTGCCCATC TGGTCGGCCC CAAAGGCCAC GTCGTCGGCA TCGATCCGCT GGAGAGCCGC
ATTGCCATCG CCCGGCTACG CCAGTCGACT AACCTCGTGT TCGACACCGG CCGTGCCGAG
GATCTGTCCC GCTTCGCGGC CGGCGAATTC GACGTCATCT ATTTCAACAG CGTGCTGCAC
TGGATCGCCG ACAAGCGCAC AGTGCTGGCC GAGGCTCAAC GGGTGCTGCG GCCGGGCGGC
CGCATCGGGC TCACCATTCA GGACCCGACG GCGCCGCACC AATCCCGACT CCTGCTGCGG
CGCGCGGTGG CCGAGTCCGG GCTCGACGCT GGGCGACTGA CCGCTCATGG CGTTCACGCC
GCGACCGACG ACGAGCTGCG TGCATTGTTC GATCAGACGG GATTCGTCGA TTATCGCAGC
GAGCTGCGGA CCCTGGTGGA GACGCATGGC AGCGCCGACG AGCTGCTCGG CTGGTCCGAG
AGCAGCGCCT TCGGCAACTT CCTGGACGGC TTTTCCTATG CCGAAGGCAA GCGGATTCGC
GCGGCCTTCG CCGAACTGGT CGAGGCGCAT CGCACCCCCG AAGGCCTGAA GCTCGCCCGC
TACCTGCGCT ACGCTTTCGC GCGCAAGCCG GATTAG
 
Protein sequence
MPDPIAVISL QQDTPELARA YEQLGVIQFN HGKLLLEPLA LRSGERVLDV GTGTGRLAEF 
AAHLVGPKGH VVGIDPLESR IAIARLRQST NLVFDTGRAE DLSRFAAGEF DVIYFNSVLH
WIADKRTVLA EAQRVLRPGG RIGLTIQDPT APHQSRLLLR RAVAESGLDA GRLTAHGVHA
ATDDELRALF DQTGFVDYRS ELRTLVETHG SADELLGWSE SSAFGNFLDG FSYAEGKRIR
AAFAELVEAH RTPEGLKLAR YLRYAFARKP D