| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4825 |
|---|
| Symbol | |
|---|
| ID | 5155413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5061195 |
|---|
| End bp | 5062322 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640559624 |
|---|
| Product | putative alcohol dehydrogenase |
|---|
| Protein accession | YP_001240755 |
|---|
| Protein GI | 148256170 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0410996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.464938 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA AGGCCGCCAT TCTCGAGGAC ATGGGCCGCG CCGGACCCTA TGCCGCCTCG
CGTCCGCTGA AGATCCTTGA CGTCGAGCTC GACGGCCCCG GTCCGGGCGA GGTGCTGGTG
CGCATCGCCG CCGCCGGCCT GTGCCATTCC GATCTCTCGG TGATCAATGG CGACCGGCCG
CGTCCCTTGC CGATGGTGCT GGGTCACGAA GCCTCGGGCG TGGTCGAGGA GGTCGGTGCC
GGCGTCGATG ATCTCGTGCG CGGCGATCAC GTCGTTTGCG TGTTCGTGCC GAGCTGCGGG
CATTGCGCGC CATGTGCGCA AGGGCGGCCG GCGCTGTGCG AGCCGGGCGC CGAGCACAAT
GGCAAGGGCG ATCTGCTCAG CGGCGGCTTC CGTCTGCATC GCGGCGAGGC GAGGGTGCAC
CATCATTGCG GCGTGTCGTG CTTCGCCGAA TACGCCACGA TGTCGCGGCG CTCGCTGGTG
AAGGTGCAGA AGGAGGTGCC GCTGCACATT GCCGCGCTGA TGGGCTGCGC CGTGCTGACC
GGCACCGGCG CCGTCTTCAA CGGCGGCGAT GTCGGTCCCG GAGGCAAGGC TGCGATCATC
GGACTCGGCG GCGTCGGGCT GGCCGCAGTC ATGGGCGCGG TCGCGATCGG TGCCGAGACC
GTGGTCGCGA TCGACATGTT CGAGCCGAAG CTCGCGCTGG CACGCGAGCT CGGCGCCACC
CACGCCTTCA ACGGTTCTGA TCCGGACCTC GTCGCGAAGG TCAAGGAGGC GACCAAGGGC
GGCGTCGATG CAGCGCTGGA ATTCGCAGGC TCCGTCAAGG CGCTGGAGAT GGGCTACGCC
ATCACGCGGC GGGGCGGCAC CACGGTGACG GCCGGCCTTC CAAATCCCAA GGCGGTGCTG
TCGCTGCCGG CGGTGTCCTT GGTTGCGGAG GAGCGCACGC TGAAAGGCAG CTATCTCGGC
TCCGGCGTGC CGTCGCGCGA CATTCCGCGC TTCCTGGGCC TCTATCATCG CGGCCGGTTG
CCGGTGGACA GGCTGCTGAC GCACCGCATC CGGCTGGACG ACATCAATGC CGGCTTCGAT
CGCCTCGCCG ACGGCAGTGC GATCCGCCAG GTCGTCGAAT TCAACTGA
|
|---|
| Protein sequence | MKIKAAILED MGRAGPYAAS RPLKILDVEL DGPGPGEVLV RIAAAGLCHS DLSVINGDRP
RPLPMVLGHE ASGVVEEVGA GVDDLVRGDH VVCVFVPSCG HCAPCAQGRP ALCEPGAEHN
GKGDLLSGGF RLHRGEARVH HHCGVSCFAE YATMSRRSLV KVQKEVPLHI AALMGCAVLT
GTGAVFNGGD VGPGGKAAII GLGGVGLAAV MGAVAIGAET VVAIDMFEPK LALARELGAT
HAFNGSDPDL VAKVKEATKG GVDAALEFAG SVKALEMGYA ITRRGGTTVT AGLPNPKAVL
SLPAVSLVAE ERTLKGSYLG SGVPSRDIPR FLGLYHRGRL PVDRLLTHRI RLDDINAGFD
RLADGSAIRQ VVEFN
|
|---|
| |