Gene BBta_4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4817 
Symbol 
ID5155122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5051798 
End bp5052580 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID640559616 
Productputative ABC transporter, ATP-binding protein 
Protein accessionYP_001240747 
Protein GI148256162 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.355184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.730838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAG TGGCGGACCG GCTCTCGGCA CTCGGCTCGA CGGCGGCACT CGAACTGCGC 
GGCGTCACTC GCATGTTCGG CGCGCTGGCG GCGTTGACCG ATATCACCAT CACGGTTCGG
CCAGGCGAGC GGCGCGCGGT GCTGGGCTCG AACGGCGCCG GCAAGACGAC GCTGTTCAAC
TGCGTCACCG GCGATTTCCT GCCGACCTCG GGCACGATCC GCTTCTTCGG CGAGGACATC
ACGGCCTTTC CGCCCCATGA GCGGATCCGC CGCGGGCTGC GCCGGACCTA CCAGATCTCC
GCGCTGTTCC TCGGCCTGTC GGTGCGGGAC AACGTCTATC TCGCCTGCCG CGGCGTGTCG
CGTGCGCGCT TCTCGATGCT GCGCCCCCGC GCCAATGATG CGCTGATGCA GGCGACCGAG
CGGCTGATCG AAGCCGTGCA TCTCACGTCG GTTCGCGAGC GGTTCGTCTC CGAGCTCGCC
CATGGCCAGC AACGGCAGCT CGAAATCGCG CTGGCGCTGG CCGGGGCGCC GCGCTTCATC
CTGTTCGACG AGCCGGCCGC GGGCCTGTCG CCGACCGAGC GGCGCGAACT GGTGGAGATC
CTGACCGCGC TGCCGGCGCA TATCGGCTAC ATCATCATCG AGCACGACAT GGACGTGGCG
CTGCGCGTCG TCGAGAGCGT GACGATGATG CACAATGGCC GCATCTTCAA GGAGGGCGCG
CCGCACGAGA TCGAATCCGA TCCGGAGGTG CAGGAGCTGT ATCTCGGAGG CGGCCATGAA
TGA
 
Protein sequence
MDRVADRLSA LGSTAALELR GVTRMFGALA ALTDITITVR PGERRAVLGS NGAGKTTLFN 
CVTGDFLPTS GTIRFFGEDI TAFPPHERIR RGLRRTYQIS ALFLGLSVRD NVYLACRGVS
RARFSMLRPR ANDALMQATE RLIEAVHLTS VRERFVSELA HGQQRQLEIA LALAGAPRFI
LFDEPAAGLS PTERRELVEI LTALPAHIGY IIIEHDMDVA LRVVESVTMM HNGRIFKEGA
PHEIESDPEV QELYLGGGHE