Gene BBta_4721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4721 
Symbol 
ID5153196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4948165 
End bp4948650 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID640559523 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001240654 
Protein GI148256069 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTC CCATTCTTCC CCTCATCGAA GCCGCCAGCC GCTGGCCCGA GCGCGGCGCG 
CTCGTCGGCC TTGATCTGGG CACCAAGACG ATCGGCGTCG CGGTGTCCGA TCCGGACCGC
CGGCTCGCCA CCGGCGTCGA GACCATCCAG CGCAAGGCCT TCAAGGCCGA TGCGGCGCGG
CTGCTTGCGA TCTCAAGCGA GCGCAAGGTG GTCGGCTTCG TGCTCGGCCT GCCGATCAAC
ATGGACGGCA GTGAGGGACC TCGGGCGCAA TCGACCCGCG CATTCGCGCG TAATCTCGCG
AACCTGACGG ACTTGCCGAT CGGCCTGTGG GACGAGCGGC TGTCGACGGC GGCAGTCGAA
CGCGAACTGA TCGGCATGGA TGTCAGCCGC GCCCGGCGCG CCGAGGTCAT CGACACCCAC
GCCGCGATCT TCATCCTGCA GGGCGCGCTC GACCGGCTCG CCACGCTCCG CCGGTCCGGC
CAATAG
 
Protein sequence
MPAPILPLIE AASRWPERGA LVGLDLGTKT IGVAVSDPDR RLATGVETIQ RKAFKADAAR 
LLAISSERKV VGFVLGLPIN MDGSEGPRAQ STRAFARNLA NLTDLPIGLW DERLSTAAVE
RELIGMDVSR ARRAEVIDTH AAIFILQGAL DRLATLRRSG Q