| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4717 |
|---|
| Symbol | |
|---|
| ID | 5152786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4943316 |
|---|
| End bp | 4944275 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640559519 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001240650 |
|---|
| Protein GI | 148256065 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.718426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACG CGTTCGTGTT GTGCTGCTCG ATTGCCTTGA TGGGTGTGAT CGGGACGGCC
AATGCCCAAG AGAAGACCCA GGACAAGCCC CAAGACTGGA CCAAATCGAA ATGGGGACCG
CAGGACGAGA TCGGCGCCGC CAACTACATC ACGCCGGAAC TCGTGGTCAA AGCGGCCTCG
CTGGTGAAGA CCGGCAAGAC CTACCCGCTC GGCATGATCA TCGACTCCAA GACGCCGGCC
TATCCACCGC GTTCCTTCAA GATCACGGTG GTGCAGCCGG GACAGGCCGG CATCCCAGGG
CTCGGCCCCA ACAAGGCGAC TTATAATGAC GACATCATCG AAGGCTGGGT CGGCGTCGGC
AGCCAGCTCG ACGGCCTCGG CCATCTCGGC ATCGAGCACG TCTATTACAA CGGCAACAAA
CTGCTCGACT TCGCTGATCC GACCGGCCTG AAGAAGCTGG GCATCGAGAA GGTACCGCCG
CTGGTGGCGC GCGGCGTCCT GCTCGACATG GCCGCCTACT ACAACACCGA CGTCGTCAAG
GAAGGCACCG CCTTCAACGT CAAGGAGATC GAGGAGGCCG CCAAGAAACA GGGCGTCGAG
ATCCGCCAGG GCGACATCGT CATCTTCCAT ACCGGCTGGC TCGGCCTGAT CGGCAAGGAC
GACAAGCGCT ACAGCGCCGG CGAGCCCGGT CTGGGCGTCG AAGGCGCCAA ATACCTGACC
TCGAAGGGCG TGGTGGCCAT CGGGGCCGAC AATTGGGCGG TGGAGGCGAT TCCGTTCGAG
TCGTCGAACC TGTTCGAGGT ACACCAGATC CTGCTCGCGA TGAACGGGAC CTACATCCTC
GAGAACATGA ACACCGCCGA TCTCGCCAGG GACAAAGGCT ACGAGTTCCT GTTCGTGCTG
GGCCAGCCGC GCTGGCGCGG CGGCGTCCAG GGCAACATCA ACCCGATCGC GATCCGCTGA
|
|---|
| Protein sequence | MRNAFVLCCS IALMGVIGTA NAQEKTQDKP QDWTKSKWGP QDEIGAANYI TPELVVKAAS
LVKTGKTYPL GMIIDSKTPA YPPRSFKITV VQPGQAGIPG LGPNKATYND DIIEGWVGVG
SQLDGLGHLG IEHVYYNGNK LLDFADPTGL KKLGIEKVPP LVARGVLLDM AAYYNTDVVK
EGTAFNVKEI EEAAKKQGVE IRQGDIVIFH TGWLGLIGKD DKRYSAGEPG LGVEGAKYLT
SKGVVAIGAD NWAVEAIPFE SSNLFEVHQI LLAMNGTYIL ENMNTADLAR DKGYEFLFVL
GQPRWRGGVQ GNINPIAIR
|
|---|
| |