Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4704 |
Symbol | |
ID | 5150126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4932856 |
End bp | 4934064 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559506 |
Product | putative drug resistance transporter |
Protein accession | YP_001240637 |
Protein GI | 148256052 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.096379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.25889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAT CCGTACCGTT CTCCGTCGCT GTTGCGCTGG GCCTGATCAC GCTGCTCGCC CCGGTGTCGG TCGACATGTA TCTGCCCTCG CTCCCGGTGA TGGCCGAGGA GATGAACACG ACCTATCCCG CGATGCAGCT GACATTGATG GTGTTCCTGC TGGCCATGGG GGCAGGGCAG ATCGTCTTCG GTCCGGTCAT CGACGCCTAT GGTCGTCGCC GGCCCTTGCT TGTCGCCCTC GCGATCTTCG TGGTGGCGTC GCTCTGCGCG GCGGTGGCGC ACTCGGTCGA GGCGTTGCTG CTCGCGCGGT TGCTGCAAGG CTTGGCGGCG TCACTTGCGA TCGTGACGGC GATGAGCACC GTGCGCGACA TCGCCTCGGG TGTCGCGGCC GTGCAGATTT TCGCGTTGCT GATGACGATC CAAGGGCTCG GCCCGGTGAT GGCGCCGGTG CTGGGCGGAA TGATCGGCGC CGGGCTCGGC TGGCGCGCGG TCTTCTACTT TCTTGCCGCT CTCGGCGCGA TCGTGCTCGC GAATACGTTC ACGAGGCTGC CTGAGAGCTT GCCGCCGAAC AAGCGATCGT CACTCCATCC CGTTCAGGTG TGGCGGACCT ATGTTAGCAT TGTCATGGAT CGACGCTTCT TGGTGCCGGG CCTCGCGCTC TCCGGCGTCT TCTTTATTCT GTTCGGCTAT ATCGGCGGCG CGTCCTATGT GTATCAGTCG TTCTATGGCC TGCCGTCGCG CGAGTTCGGC TTCATCTTCG GCGCGACGGG GATCGCCGTT CTGATCGGCG CGATCATCTG CGCGAGGCTG GTCAAGACGT TCGATGTCGA GAGGCTTGCC TTGGCCGGGG TGCTGGCGAT GCTGGGCGGC GCGCTGATCG GATGGGTGTC GGTGCTGGTC GGTATCGGTC TCCCCGGAAT CGTCGCCGGC ATGATCCTGA CGCTCGCCGG TCTCGGCACT GCAGAGGCCA CGCTGACATC GATTGCGCTC GCCTCGCGCG CGTCAGCGCT TGGCGCAAGC ACGGCGCTGC TTGGGGCGGT TCCGCTGGTG CTTGGGGCGG CGGCGACGCC CTTGGCTGCG CTGCTGGCCG AGATCGGCCC CGCATGGTGG CTGGCCTTTC TTGCGCTGGC CGGGGTCGTG ACGGCCGGCC TGACCCTTGC CTCCCTGCGC ATGGTGGCTG GCCAGGGTGT TCGGGTCGTG CAGCACTGA
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Protein sequence | MTQSVPFSVA VALGLITLLA PVSVDMYLPS LPVMAEEMNT TYPAMQLTLM VFLLAMGAGQ IVFGPVIDAY GRRRPLLVAL AIFVVASLCA AVAHSVEALL LARLLQGLAA SLAIVTAMST VRDIASGVAA VQIFALLMTI QGLGPVMAPV LGGMIGAGLG WRAVFYFLAA LGAIVLANTF TRLPESLPPN KRSSLHPVQV WRTYVSIVMD RRFLVPGLAL SGVFFILFGY IGGASYVYQS FYGLPSREFG FIFGATGIAV LIGAIICARL VKTFDVERLA LAGVLAMLGG ALIGWVSVLV GIGLPGIVAG MILTLAGLGT AEATLTSIAL ASRASALGAS TALLGAVPLV LGAAATPLAA LLAEIGPAWW LAFLALAGVV TAGLTLASLR MVAGQGVRVV QH
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