Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4565 |
Symbol | pepT |
ID | 5155777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4784373 |
End bp | 4785629 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640559365 |
Product | peptidase T |
Protein accession | YP_001240501 |
Protein GI | 148255916 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.36314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA CGTCGCTCAG CTTCACCCAC TCCGTCCTGG AACGGTTCCT CCGCTACGTC GTGATCGACA CCCAGTCGGA CCCGACCTCC CCGACCTGTC CCTCGACCCT GAAGCAGAAG AATCTCGGGC GCCTGCTCGC CGCCGAGCTG CAGGCGATGG GGCTCGCCGA TGCTCACCTC GACGATCACG GCTACGTCTA TGCGACGATC CCGGCAAATA CCGACAAGCA CGTGCCGGTG ATCTGCTTCT GCTCGCACAT GGACACGTCG CCCGACTGCT CCGGCGCCGA CGTGAAGCCC CAGATCATCC GCAACTATCA GGGTGGTGAC ATCGTGCTGC CCGGCGATCC AAGCCAGGTC ATCCGTCCCG GCGAACATCC CGCGCTGCAG GACCAGATCG GCAATGACAT CGTCACATCG GACGGCACCA CGCTGCTGGG TGCCGACAAC AAGGCCGGCA TCGCCGAGAT CATGGATGCG GCGCAATTTC TGCTCAGCAA TCCCCAGATC AAGCACGGCA CGATCAAGAT CCTGTTCACT CCCGATGAGG AGATCGGCCG CGGCGTCGAT CGGGTCGACC TGAAGAAGCT CGGCGCCGAT TTCGGCTACA CGATGGACGG CGAGACCGCG GGCAATATTG AGGACGAGAC CTTCTCCGCC GACGGCGCGA CCGTGATCAT CAACGGTGTC AGCGCCCATC CCGGCTTTGC CAAAGGCAAG ATCGAGCATG CGATCAAGAT CGCTTCGGCG ATCGTGGAGC GCCTGCCCAA GGACACCTGC TCGCCCGAGA CCACGGAAGG CAAGGAAGGC TTCCTGCATC CGGTGGCGAT CTCCGGCACG CTTGAGCAAG CCCGCCTCGA TTTCATCGTC CGCGATTTCA GCGAGCAGGG CTTGCGGCAG AAGGAGGCGC TGCTCGAGGA CATCGTGCGC GACGTCATGA CGAACTATCC GCATTCCAGC TACCGGATGG ACGTCCGGCA GCAATACCGC AACATGAAGG AGGTCATCGA TCTCCATCCG CAGATCGTGA CCTATGCCGA GGATGCGATC CGGCGCGCCG GCCTGACTCC GATGCGGACC TCGATTCGCG GCGGCACCGA CGGGTCGCGG CTGTCTTTCA TGGGGCTGCC CTGCCCCAAC ATCTTCGCCG GCGAGCACGC CTTCCACTCG CGCCTCGAAT GGGTCAGCGT CCGTGACATG GAGAAGGCGG TGCAGACCAT CGTGCATCTG GCGATGATCT GGGAAGAGCG CTCCTGA
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Protein sequence | MSDTSLSFTH SVLERFLRYV VIDTQSDPTS PTCPSTLKQK NLGRLLAAEL QAMGLADAHL DDHGYVYATI PANTDKHVPV ICFCSHMDTS PDCSGADVKP QIIRNYQGGD IVLPGDPSQV IRPGEHPALQ DQIGNDIVTS DGTTLLGADN KAGIAEIMDA AQFLLSNPQI KHGTIKILFT PDEEIGRGVD RVDLKKLGAD FGYTMDGETA GNIEDETFSA DGATVIINGV SAHPGFAKGK IEHAIKIASA IVERLPKDTC SPETTEGKEG FLHPVAISGT LEQARLDFIV RDFSEQGLRQ KEALLEDIVR DVMTNYPHSS YRMDVRQQYR NMKEVIDLHP QIVTYAEDAI RRAGLTPMRT SIRGGTDGSR LSFMGLPCPN IFAGEHAFHS RLEWVSVRDM EKAVQTIVHL AMIWEERS
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