Gene BBta_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4536 
Symbol 
ID5150327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4755104 
End bp4755889 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID640559336 
ProductDJ-1/PfpI family protein 
Protein accessionYP_001240473 
Protein GI148255888 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGAC GCGTCTTCAA CACGTCGCTT CTGGCGGGGT CACTGGCCGG CCTGCTGCTG 
CCGGGCGCAC GGGCTGCGGA GACACCGCGA CCGGCGGCCA AGCCGGTCAT CGGCCTGCTC
GTCTATCCCG GGATGATTCT GCTCGATCTC ACCGGGCCGC TGACCGTCTT CAACATCATG
CAGGCCGACA TCCACCTGAT CGGAGCGTCG ATGGCTCCGG TCATGACGGA TGTCGGAATT
CCCGTGACTC CAACCCACAG CTTCGAAACC GCCGCGACCG GGCTCGATGT GCTGTTCGTC
CCGGGCGGGC TGAAGGGCAC CGTCGACGGC ATGAACGATC CGCGCACGAT CGACTTCGTC
GCCAGGCGCG GCGAAACCGC ACGCTTCGTC ACCAGCGTCT GCACCGGCGC GTTGCTGCTC
GGTGCGGCGG GCCTGTTGAA GGGCTATAAG GCGACGTCGC ATTGGTACGT GCGCGATCTG
CTGCCGCTGA TGGGCGCCAC CATGATCGCG GATCGCGTGG TGTCGGACCG CAACCGCATC
ACGGCCGGTG GCGTCACCGC GGGTATCGAT TTCGGCCTGG CGCTGGCCGC GCAGCTCACC
GACGAAGACA CCGCGCGGCG CATCCAGCTG CTGATCGAAT ATGACCCGCA GCCGCCCTTC
GCGGCCGGAT CGCCGGAGCG TGCCGGGCCG GAAGCCACCC AGGCGGTGCT GACCCAGCGC
GGGCCGCTGA TCCGCTTGGC CGAGCAGGCG GCGCGCGCCG CCGGCGCCAG GATCGGCGTG
CCATGA
 
Protein sequence
MDRRVFNTSL LAGSLAGLLL PGARAAETPR PAAKPVIGLL VYPGMILLDL TGPLTVFNIM 
QADIHLIGAS MAPVMTDVGI PVTPTHSFET AATGLDVLFV PGGLKGTVDG MNDPRTIDFV
ARRGETARFV TSVCTGALLL GAAGLLKGYK ATSHWYVRDL LPLMGATMIA DRVVSDRNRI
TAGGVTAGID FGLALAAQLT DEDTARRIQL LIEYDPQPPF AAGSPERAGP EATQAVLTQR
GPLIRLAEQA ARAAGARIGV P