| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4530 |
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| Symbol | lolC |
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| ID | 5149989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4747535 |
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| End bp | 4748815 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640559330 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001240467 |
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| Protein GI | 148255882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.947625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAA CCATGACCGA ACCCCAGCAG ACCGTGCCCT TCGCCCCCTT CGAGTGGATG
CTGTCGGGGC GCTATCTGCG TGCGCGGCGT CGGGAAGGGT TCATCTCCGT CATTGCCGGC
TTCTCCTTCC TCGGCATCAT GCTCGGCGTC GCGACCTTGA TCATCGTGAT GGCGGTCATG
AATGGCTTCC GAAAGGAGCT GCTCGACAAG ATCCTCGGTC TCAACGGACA CCTGCTCGTG
CAGCCGCTGG AGTCGCCACT GACCGACTGG AAGGATGTCT CCGAGCGGAT CTCGCAGGTG
CAGGGCATCC GCCTTGCGGC GCCCGTGGTC GACGGCCAGG GTCTCGGCTC GTCGCCCTTC
AACGCATCGG GCGTGTTCAT CCGCGGCATC CGCTCGCAGG ATCTCGTCAA CCTGACGTCG
ATCGCCAAGA ACATCAAGCA GGGCACGCTC GAAGGCTTCG ACGAGGGCCA GGGCGTCGCG
ATCGGCCGCC GGCTGGCCGA CCTGTTGTCG CTGCATGCGG GCGACAGCAT CACCCTGGTG
GCGCCGAAGG GCGCCGTGAC GCCGATGGGC ACGACGCCGC GCATCAAGCC CTATAAGGTC
GCGGCGGTGT TCGAGATCGG CATGTCGGAA TATGATTCGA GCTTCGTGTT CATGCCGTTG
TCGGAAGCGC AGGCCTATTT CAACCGCAAC AACGACGTCA CCGCGATCGA GATCTTCACC
AGCAATCCGG ACAAGGTGGA GCAGTTTCGC AAGACGGTGA CCGAGGCGGC GGGCCGTCCG
GTGTTCCTGG TCGACTGGCG CCAGCGCAAT TCGACCTTCT TCAACGCGCT CCAGGTCGAG
CGCAACGTGA TGTTCCTGAT CCTGACGCTG ATCGTGCTGG TCGCCGCGCT CAACATTGTC
TCGGGCCTGA TCATGCTGGT GAAGGACAAG GGCCAGGATA TCGCGGTGCT CAGGACGATG
GGGGCGTCGC AGGGCGCGAT CATGCGGATT TTCCTGATCA CCGGCGCCTC GATCGGCGTG
GTCGGGACCC TCACCGGCTT CATCGTTGGT CTCCTGATCT GCATGAACAT CGAGACCATC
CGGTTGTTTC TGTCATGGTT GACCAACACG GATTTGTTCG ATCCGACCCT GTACTTCCTG
TCGAAGCTGC CGGCTGAGAT CGATGCCGGC GAGACGAGCG CGGTGGTCAT CATGGCTCTG
ACTTTGTCTT TTCTGGCCAC GCTCTACCCA TCCTGGCGCG CCGCCCGCTT AGACCCGGTC
GAAGCGCTTC GCTACGAGTG A
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| Protein sequence | MDETMTEPQQ TVPFAPFEWM LSGRYLRARR REGFISVIAG FSFLGIMLGV ATLIIVMAVM
NGFRKELLDK ILGLNGHLLV QPLESPLTDW KDVSERISQV QGIRLAAPVV DGQGLGSSPF
NASGVFIRGI RSQDLVNLTS IAKNIKQGTL EGFDEGQGVA IGRRLADLLS LHAGDSITLV
APKGAVTPMG TTPRIKPYKV AAVFEIGMSE YDSSFVFMPL SEAQAYFNRN NDVTAIEIFT
SNPDKVEQFR KTVTEAAGRP VFLVDWRQRN STFFNALQVE RNVMFLILTL IVLVAALNIV
SGLIMLVKDK GQDIAVLRTM GASQGAIMRI FLITGASIGV VGTLTGFIVG LLICMNIETI
RLFLSWLTNT DLFDPTLYFL SKLPAEIDAG ETSAVVIMAL TLSFLATLYP SWRAARLDPV
EALRYE
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