Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4510 |
Symbol | |
ID | 5154544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4724686 |
End bp | 4725837 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640559311 |
Product | putative Zinc metalloprotease |
Protein accession | YP_001240448 |
Protein GI | 148255863 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.229371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.52884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGT TTTTCCACCA TATCTTCAAT ACGTTGAGCA ACGGCCTTCT CGGCTATATC GTCCCGTTCC TGTTCGTGCT GACGATCGTG GTGTTCTTCC ACGAACTCGG CCACTTCCTG ATCGCGCGCT GGGCGGGCGT GAAGGTGCTA ACGTTTTCGC TCGGATTTGG TCCGGAACTG ATCGGTTTCA ACGACCGCCA CAACACCCGC TGGAAGATCT CCGCGATCCC GCTCGGCGGC TATGTGAAGT TCTTCGGCGA CGAATCCGAG GCCTCGACAC CGTCGGCCGA GGCGCTGGCC AAGATGACGC CGCAGGAGCG CGCCGACAGC TTCCACCACA AGACGGTCGG CCAGCGCGCC GCGATCGTCG CGGCCGGCCC GATCGCCAAT TTCATCCTCG CCGTGATCAT CTTCGCCGGC ATGGCGCTGT ATTTCGGCAA GCCGAACACC ACGCCGCGGG TCGACGCGGT GCAGCCGGAC AGCGTCGCGG CGGCGGCCGG CTTCAAGAAT GGTGACGTTA TCGCCGCCAT TGACGGCCGG CCGATTGAGA CCTTCGCCGA CATGCAGCGG GTGGTGTCGG TCAGCGCCGG CTCGGAATTG TCGTTTCTGA TCAAGCGCGA CGGCACGGAA CTGACCCTGA AGGCCACCCC GGCGCTGAAG GAGGTCAAGG ATCTGTTCGG CAACAGCCAC CGGATCGGTG TGCTCGGCAT TCAGTACAAT GCCAAGCCGG ACGAATCGCG CTCGATCCCG GTCGGGTTCT TCGAATCGAT CAAGATCGGC TTCGAGCAGG TCTGGTTCAT CATCGCGACA ACCTTCAAGT TCATCGCGTC GTTGTTCGCG GGAGCCGGGA GTGCCGGCGA TGTCGGCGGT CCGATCCGAA TCGCACAACT CTCCGGGCAG GCTGCGAGCC TTGGTTTCCA ATTCGTTGTG CAGCTGTGTG CGACCCTGTC GGTCTCCATC GGCCTGTTGA ACCTGTTCCC AGTTCCTCTG CTCGATGGCG GGCACCTGCT GTTTTACGGG GTTGAAGCGG TCCGCGGCCG TCCGCTGTCC GAGCGGGCGC AGGAAATGGG GTTCCGAATC GGCCTGGGGC TGGTTCTGAT GCTGATGGTG TTCGCGACCT ACAACGATAT TCTGCACCTC GCCGGGTCGT GA
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Protein sequence | MSEFFHHIFN TLSNGLLGYI VPFLFVLTIV VFFHELGHFL IARWAGVKVL TFSLGFGPEL IGFNDRHNTR WKISAIPLGG YVKFFGDESE ASTPSAEALA KMTPQERADS FHHKTVGQRA AIVAAGPIAN FILAVIIFAG MALYFGKPNT TPRVDAVQPD SVAAAAGFKN GDVIAAIDGR PIETFADMQR VVSVSAGSEL SFLIKRDGTE LTLKATPALK EVKDLFGNSH RIGVLGIQYN AKPDESRSIP VGFFESIKIG FEQVWFIIAT TFKFIASLFA GAGSAGDVGG PIRIAQLSGQ AASLGFQFVV QLCATLSVSI GLLNLFPVPL LDGGHLLFYG VEAVRGRPLS ERAQEMGFRI GLGLVLMLMV FATYNDILHL AGS
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