Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4509 |
Symbol | |
ID | 5154543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4721955 |
End bp | 4724513 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640559310 |
Product | surface antigen domain-containing protein |
Protein accession | YP_001240447 |
Protein GI | 148255862 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.263137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.782892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCG GATTGCGGGT GCGGGGGGGC ATGCTGGCCA CCCTAATCAT GTTCGCCGTT CCGGTGGCTC TGCCGCTGGC GAATGTGATG ATGTCGTCGC CAGCCGCCGC ACAGTCGGTC AATGCGATCG AAGTTGTCGG CAACCGTCGC GTCGAGGTGG AGACCATCCG CTCGTATTTC AAGCCGGGTC CGGGCGGCAC GCTTGATGCC GGCCGCGTTG ACGACGGCCT CAAGGCCCTG ATCGAGACCG GCTTGTTCTC GGATGTGAAG ATCAACCGCC AGGGCGGACG CCTGGTCGTG ACCGTGGTGG AAAACCCGGT GATCGGCCGC GTCGCCTTCG AGGGCAACAA GAAGGTCAAG GACGAGCAGC TCCAGGCCGA GGTCCAGTCG AAGCCGCGCG GCACCCTGTC GCGGCCGATG GTTCAGTCGG ATGCGCAGCG CATCGCCGAG ATCTATCGCC GGTCTGGCCG TTACGACGTG CGCGTCACGC CGGAAATGAT CGAGCAGCCG AACAACCGCG TCGACCTGAT CTTCACGGTC GAGGAAGGCG CCAAGACCGG CGTGAAGTCG ATCGAGTTCG TCGGCAACAA CGCGTTCTCG TCCTACCGTC TGAAGGACGT CATCAAGACG CACGAGACCA ATCTTTTAAG CTTCCTCGGC TCCGGCGACG TGTACGATCC GGACCGTGTC GAGGCCGACC GCGATCTCAT CCGCCGCTTT TACCTCAAGA ACGGCTACGC CGACGTGCAG GTCGTCGCCG CGCTCACCGA ATATGATCCG GAGCGCAAGG GCTTCCTGGT CACCTTCAAG ATCGAGGAAG GCCAGCAATA TCGGGTCGGT TCGGTCGACT TCCAGTCGAC GATCCCGACG CTCGACCCCA ATTCGCTGCG CACGTTCTCG CGGGTGAATG TCGGCTCGCT CTACAACGTC GAAAGCCTCG AAAAGTCGGT CGAAGAGATG CAGATCGAGG CCTCGCGGCG CGGCTATGCC TTCGCCGTGG TGCGGCCGCG TGGCGACCGT AATTTCGAGG CCCACACCGT CTCGGTGGTG TTCGCCATCG ACGAGGGCCC GCGCACCTAT ATCGAGCGCA TCAATATCCG CGGCAACACC CGCACCCGCG ATTACGTCAT TCGTCGCGAG TTCGATATCT CCGAGGGCGA CGCCTATAAC CGTGCGCTGG TCGATCGGGC CGAGCGCCGC CTGAAGAATC TCGACTTCTT CAAGGACGTG AAGATCACGA CCGAGCCGGG CTCCTCGAGC GACCGCGTCA TCCTGGTCGT CAATCTCGAA GAGAAATCGA CCGGTGACTT CTCGATCTCC GGCGGCTATT CGACCACCGA TGGCGCGCTG GCCGAGGTGT CGATCTCGGA GCGCAACTTC CTGGGCCGCG GTCTGTTCGC CAAGGCCTCC GTCACCTACG GTCAGTTCGC CCGTGGCTAC TCGCTGTCCT TTGTCGAGCC CTATCTGCTC GACTACCGGG TGGCGCTCGG CCTCGACCTC TATCAGCGTC AGCAGCTGGC CAACAACTTC ATCTCGTACG GCACCAAGAC GCTCGGCTTC AGCCCGCGGC TCGGCTTCCA GCTGCGCGAG GATCTGTCGC TGCAGCTGCG CTACTCGATC TACCGCCAGG AGATCACGCT GCCGGCGACG CTGTCGGACT GTAACAACCT GACCGCCGGT ACCCTGATCG GCAACCGCTT CGTGCCGTTC AACCCGACGC CTGCGTTTAT CAATGCCAAT GGCGGCGTCG ATCCGACCGG CAATAACGGC CTGGGCTGCT TCGCCAACGG CGAGGCGTCG CTGCCGGTCC GCCAGGAGCT GGCGAAGGGC GCGACCCTGA CTTCGGCGCT GGGCTACACG CTCAACTACA ACACGCTGGA CAACAACAAG AACCCGACCG ACGGCCTGCT CATCGACTTC AAGCAGGACT TCGCGGGTGT TGGCGGCGAC GTGTCGTACC TGAAGACCGC GTTCGATGCG AAGTACTTCA CCCCGCTGGT GTCGGACATC GTCAGCATCG TCCATCTGCA GGGCGGTATC CTGAACAAGA TCGGCAACAC GCAGCTGCGC ATGCTCGATC ACTTCCAGAT GGGCCCGAAT CTGGTCCGCG GCTTCGCCCC GAACGGCATC GGTCCGCGTG ACATCAACCC GTTCGGCACG CAGGACGCGC TGGGCGGCAC CAAGTACTGG GGTGCTTCGC TCGAACTGCA GATGCCGTTC TGGTTCCTGC CCAAGGAAGT GGGTCTGAAG GGTGCGGTCT ATGCCGACGC CGGCGGGCTC TGGGGCTATC AGGGACCGAC GTCGTGGGCC CAGACCGGCG AGGTCAATGT GGCCGGCTGT CGGGCACCGA CGCGAGCCAC GGGAACCGTG CCTGCCAATG CCGGCACCTG CCTCGGACTG CAGTTCGACG ACCAGAACAA GGTCCGCAGC TCGGTCGGTG TGGGTCTGGT GTGGGCGTCG CCGTTCGGAC CGCTGCGCTT CGACTACGCG ATCCCGCTCA CCAAGGGGCA GTTCGACCGG ACCCAGGAAT TCCGCTTCGG TGGTGGCACG TCGTTCTAA
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Protein sequence | MKFGLRVRGG MLATLIMFAV PVALPLANVM MSSPAAAQSV NAIEVVGNRR VEVETIRSYF KPGPGGTLDA GRVDDGLKAL IETGLFSDVK INRQGGRLVV TVVENPVIGR VAFEGNKKVK DEQLQAEVQS KPRGTLSRPM VQSDAQRIAE IYRRSGRYDV RVTPEMIEQP NNRVDLIFTV EEGAKTGVKS IEFVGNNAFS SYRLKDVIKT HETNLLSFLG SGDVYDPDRV EADRDLIRRF YLKNGYADVQ VVAALTEYDP ERKGFLVTFK IEEGQQYRVG SVDFQSTIPT LDPNSLRTFS RVNVGSLYNV ESLEKSVEEM QIEASRRGYA FAVVRPRGDR NFEAHTVSVV FAIDEGPRTY IERINIRGNT RTRDYVIRRE FDISEGDAYN RALVDRAERR LKNLDFFKDV KITTEPGSSS DRVILVVNLE EKSTGDFSIS GGYSTTDGAL AEVSISERNF LGRGLFAKAS VTYGQFARGY SLSFVEPYLL DYRVALGLDL YQRQQLANNF ISYGTKTLGF SPRLGFQLRE DLSLQLRYSI YRQEITLPAT LSDCNNLTAG TLIGNRFVPF NPTPAFINAN GGVDPTGNNG LGCFANGEAS LPVRQELAKG ATLTSALGYT LNYNTLDNNK NPTDGLLIDF KQDFAGVGGD VSYLKTAFDA KYFTPLVSDI VSIVHLQGGI LNKIGNTQLR MLDHFQMGPN LVRGFAPNGI GPRDINPFGT QDALGGTKYW GASLELQMPF WFLPKEVGLK GAVYADAGGL WGYQGPTSWA QTGEVNVAGC RAPTRATGTV PANAGTCLGL QFDDQNKVRS SVGVGLVWAS PFGPLRFDYA IPLTKGQFDR TQEFRFGGGT SF
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