Gene BBta_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4496 
SymbollexA 
ID5154771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4707107 
End bp4707805 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID640559297 
ProductLexA repressor 
Protein accessionYP_001240434 
Protein GI148255849 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC GCAAACAGTA CGAACTTCTG CGGTTCATCA ATGAACGGCT CAAGGAAGCC 
GGTGTGCCGC CGTCCTTCGA CGAGATGAAA GATGCGCTCG ACCTGCGCTC GAAGTCCGGC
ATCCATCGCC TGATCACGGC GCTGGAGGAG CGTGGCTTCA TCCGTCGATT GCCCAATCGC
GCCCGCGCGA TCGAGGTGAT CAAGCTTCCG GAGCTGTCGC AGGCGGCCAG CAATCGCCGC
GGTTTCACGC CGTCGGTCAT CGAGGGGAAT CTCGGCAAGG TGAGAACCTC CACGCCGGCG
CTCGACGACG GCGAACGACC CGTCGCGGTG CCGGTCATGG GCCGGATTGC CGCCGGTACC
CCGATCGAGG CGCTGCAGAC CCGCAGCCAT ACGATCAGCG TTCCGGCTGA CATGCTCGGC
AATGGCGATC ATTACGCCCT CGAAGTGCGC GGCGATTCGA TGGTCGATGC CGGTATCCTC
GACGGCGACA TGGCGCTGAT CCAGCGCAAC GAGACCGCCG ACACCGGCGA CATCGTGGTG
GCGCTGATCG ACGATGAGGA AGCGACATTG AAGCGCTTCC GGCGCCGCGG CGCCTCGATC
GCGCTGGAGC CCGCCAACAC CGCTTACGAG GTGCGCATCC TGCCGCCCAA CCGGGTGAAG
ATCCAGGGCA AGCTGGTTGG CCTCTATCGC AAATACTGA
 
Protein sequence
MLTRKQYELL RFINERLKEA GVPPSFDEMK DALDLRSKSG IHRLITALEE RGFIRRLPNR 
ARAIEVIKLP ELSQAASNRR GFTPSVIEGN LGKVRTSTPA LDDGERPVAV PVMGRIAAGT
PIEALQTRSH TISVPADMLG NGDHYALEVR GDSMVDAGIL DGDMALIQRN ETADTGDIVV
ALIDDEEATL KRFRRRGASI ALEPANTAYE VRILPPNRVK IQGKLVGLYR KY