Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4448 |
Symbol | |
ID | 5153831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4657786 |
End bp | 4658487 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640559253 |
Product | putative branched-chain amino acid ABC transporter ATP-binding protein |
Protein accession | YP_001240390 |
Protein GI | 148255805 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.154991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.174311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGC TCCTCGAGGT CAAGGGTCTC AAATCCGGCT ACGGCCGGAT TCCGATCCTG TTCGGCGTCG ATCTGACGGT GGCCGACGGC GAGTATCTCG GCATTCTCGG CCACAACGGC ATGGGCAAGA CCACGGCGCT GCGGACCTTG ATGGGACATC TGCCGACCAC CGACGGCTCG GTGGTGTTCG CAGGCAAGAC CATCACGCAT CTCAAGCCGC ATGAGCGCTC GCGGCTCGGC ATCGGGCTGG TGCCGCAGGG CCGCGAGATC TTCCCGGATC TGTCGGTGAT GGAGAATCTG CGCATGGGCC TTGCTGCGGC GCCCAAGGAG GACCGCAGCG TCATCGACAC CGTGCTGCAG GATTTTCCGC GCCTGGTGCG GCTGCTCGAT CGCCGCGGCG GCGCGCTCTC CGGCGGCGAG CAGCAATTGC TGGCGCTGGC GCGCTGCCTC TGCACCAAGC CAAAGCTGAT CCTGCTGGAC GAGCCCACCG AGGGCATCCA GCCCTCCATC ATCGAGGAGA TCATCGAGAC GCTTCTGGCG CTGAAGACGC GTTGGAAGCT GTCTTTGATC GTCGTCGAGC AGAACCTGGA ATTCATCACG TCGTTATCGG ACCGCATCCT GCACATCCAG AAGGGACGCA TCACCGAGGA ACTCGATCGT GAGAGTCTGC TGGCCCGGGA AGGTCAGATG GTCCCGAGCT AG
|
Protein sequence | MSALLEVKGL KSGYGRIPIL FGVDLTVADG EYLGILGHNG MGKTTALRTL MGHLPTTDGS VVFAGKTITH LKPHERSRLG IGLVPQGREI FPDLSVMENL RMGLAAAPKE DRSVIDTVLQ DFPRLVRLLD RRGGALSGGE QQLLALARCL CTKPKLILLD EPTEGIQPSI IEEIIETLLA LKTRWKLSLI VVEQNLEFIT SLSDRILHIQ KGRITEELDR ESLLAREGQM VPS
|
| |