Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4444 |
Symbol | ureF |
ID | 5150286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4654504 |
End bp | 4655181 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640559249 |
Product | urease accessory protein UreF |
Protein accession | YP_001240386 |
Protein GI | 148255801 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.8214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGACC GCAGCGCGGC CCTGGCATTG CTGCAGCTCG GCGACAGCGC CTTTCCGGCC GGCGGCTTTG CCTTCTCCTG GGGCATCGAA GGCCTCGCCG CCGATGGCCT GCTGTCCAAT CGCGGCGATC TCGACGGCGT CATTGCTGAT CATCTCGCGC AGCGCTGGGC GAGCATGGAT CGCATTCTGC TGCGTCGCGC ATGGCAGGCG AACGACATCG CGGCGATCGC CGCTGCCGAT CGCCTCGCTG AGGCCACCAC GCCGTCGGCG GAGATGCGCG ACGGCTCGCG GCGCGCGGGC AGGGCGCTGC TCGGCGTCTG GGTCAAGCTC TCGGGTCCCT TGGCCGTATC CTATCGTGCT CGGGTGTCCG CGGATGCGAA TCTCGGTCAT CTCGCCGTCG TGCAGGCGAT CACCGGCCGC GATGCGGGCC TCGGCCTCGA GGCCGCCGAG CTGGTCTCCG GCTGGACCCT CATCACCGGC CTCGTCAGCG CCGCCGTGCG GCTCGGCCTG ATCGGTCACA TCGAGTCCCA GCGCAGCCTC GCAACCGCCC GCGCGCGGCT CACCGAGCTG CTCGCCGAGA CGCCCGACGA CGACGCGATG CCGTCGAGCT TCACGCCCTT CATCGATATC GCCGTGTCGC GCGGGCCGCT GCGGCATGTG CGCATGTTCA CGACCTGA
|
Protein sequence | MFDRSAALAL LQLGDSAFPA GGFAFSWGIE GLAADGLLSN RGDLDGVIAD HLAQRWASMD RILLRRAWQA NDIAAIAAAD RLAEATTPSA EMRDGSRRAG RALLGVWVKL SGPLAVSYRA RVSADANLGH LAVVQAITGR DAGLGLEAAE LVSGWTLITG LVSAAVRLGL IGHIESQRSL ATARARLTEL LAETPDDDAM PSSFTPFIDI AVSRGPLRHV RMFTT
|
| |