| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4430 |
|---|
| Symbol | |
|---|
| ID | 5153973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4640929 |
|---|
| End bp | 4641669 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640559235 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001240372 |
|---|
| Protein GI | 148255787 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.861284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGG CCGTGATATC CGACGTGCAT GGCAATCTGC CGGCGCTGGA GGCGGTGCTT
GCGGACATCG AGACGCGCGG CGTCGACGCC ACGATCAATC TCGGCGACTG TGTGACCGGT
CCGTTGTGGC CGCGTGAAAC CTTCGCATTG CTGGAGCAGC TGGCGCTGCC GACGGTGCGG
GGCAATCATG ATCGCTGGAT CCAGGAATGG CCCGAGGAGA AGCTCTCGCC GGCCGGCCGG
TTTTCGCGGG CAGCGCTGAC CGCCGAGCAG CGTCTCCATT TGCATGGCCT GCCTGCGCGG
ATTGCGCTGG AGCAGGGCAT TCTCGCCGTT CACGGCACGC CCGACGACGA CAGTGCCTGT
CTGCTTGAGG AGATGTTGGA GGACGGCCGC TATGTCCCGG CCCGTCGCGA CGTGCTGACG
TCGCGCCTCG CCAATATCGG CGGTGCCGGG CTCGTCCTGT GCGGACATAG TCACCGGCAG
GCGGTCGTGC AGGTGCTCCG CGGCCCGTTG ATCGTCAATC CCGGCAGCGT CGGTTGTCCT
GTCTTCGGCG ACATTCCGAT CGCCGCCCAG CTCGAATATC GTTCGCCGCA TGCCCGTTAC
GCCATCCTGA CGGAGCGGCG CGGCCATTGG CAGGCGGAGC TGCTGGCGCT GACCTATGAT
TGGGATCGCG CCGCGGCGCG CGCCGTCGAG AACGGCTTCC CGAATTGGGC CAGCGCCTAC
GCCTCCGGTG CCGTGCTCTG A
|
|---|
| Protein sequence | MRLAVISDVH GNLPALEAVL ADIETRGVDA TINLGDCVTG PLWPRETFAL LEQLALPTVR
GNHDRWIQEW PEEKLSPAGR FSRAALTAEQ RLHLHGLPAR IALEQGILAV HGTPDDDSAC
LLEEMLEDGR YVPARRDVLT SRLANIGGAG LVLCGHSHRQ AVVQVLRGPL IVNPGSVGCP
VFGDIPIAAQ LEYRSPHARY AILTERRGHW QAELLALTYD WDRAAARAVE NGFPNWASAY
ASGAVL
|
|---|
| |