Gene BBta_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4407 
SymbolyajC 
ID5153172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4620218 
End bp4620574 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID640559215 
Productprotein translocase subunit yajC 
Protein accessionYP_001240352 
Protein GI148255767 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.201974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTA CCCCTGCCTA TGCCCAGGCC GCCGGCGCTG GTGACACCAA CAGCATGCTG 
ATGTCGCTGC TGCCCTTCGC GCTGATCTTC GTGATCATGT ACTTCCTGAT CCTGCGGCCG
CAGCAGAAGA AGGTCAAAGA GCACGCCGAC CTGGTCAAGA ACGTCCGCCG CGGCGACACG
ATCGTGACCC AGGGCGGCCT GGTCGGCAAG GTCACCAAGG TCGTCGACGA TGATCAGGTC
GAGTTCGAGA TTGCCGACGG CGTCCGCGTG CGCCAGATGC GCCAGATGAT CACGGGCGTG
CGCACCAAGG GCGAGCCGGC CAAGGCCGAC GCCAAGGACG AGAAGGCGGC GAGCTGA
 
Protein sequence
MLITPAYAQA AGAGDTNSML MSLLPFALIF VIMYFLILRP QQKKVKEHAD LVKNVRRGDT 
IVTQGGLVGK VTKVVDDDQV EFEIADGVRV RQMRQMITGV RTKGEPAKAD AKDEKAAS