Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4378 |
Symbol | |
ID | 5153262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4593566 |
End bp | 4594204 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559188 |
Product | putative outer-membrane protein, putative secreted protein |
Protein accession | YP_001240325 |
Protein GI | 148255740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.71482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0231919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGA TCCTGCTCGC GACCGTGGCC CTGGCCGCCC TGGCCGCTCC CGCCGCCGCC GCAGATCTCG CCGCGCGCCC GACCTACACC AAGGCCCCCG TCCTCGCGCC GGTGCAGACC TGGACCGGTT TCTACATCGG TGCCTTTGGC GGTTATGCCA ATGAAGACGC CAGCACCGCA GCGTTGAAGG GCGGTTTCGC AGGCGGCACT GTCGGTTACA ACTGGCAGCA GGGACCGCTG GTGTTCGGTC TGGAAGCAGA CGCAGCCTGG GCTGACATCA ACGCCACCGT GGGCATCCCG GGTGTCTTCG GCCTGACCGA CCGCATCGAA TCGACCGGCA CCGTCCGCGG CCGCATCGGC TACGCCTTCG ACACCGTGCT GCTGTACGGC ACCGGTGGTT ACGCCTGGGG CAACAACAAG CTGTCCGCCA CCGTGGGTGG CGTGGCCGGT TCCGAGACCA AGTTCCTGAG CGGCTGGGCC GCCGGCGCTG GCGTCGAGTG GATGTTCGCT CCGAAGTGGT CGCTGAAGGG CGAGTACCTC TACAAGAGCC TCGAGAGCAG CACCTATTTC GGTGGCGCTG TTCCGCTCGG CACGCTCAAC CTGCACACCT TCCAGGTCGG CGTGAACTAT CACTTCTAA
|
Protein sequence | MKKILLATVA LAALAAPAAA ADLAARPTYT KAPVLAPVQT WTGFYIGAFG GYANEDASTA ALKGGFAGGT VGYNWQQGPL VFGLEADAAW ADINATVGIP GVFGLTDRIE STGTVRGRIG YAFDTVLLYG TGGYAWGNNK LSATVGGVAG SETKFLSGWA AGAGVEWMFA PKWSLKGEYL YKSLESSTYF GGAVPLGTLN LHTFQVGVNY HF
|
| |