Gene BBta_4354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4354 
Symbol 
ID5152757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4570752 
End bp4572185 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content67% 
IMG OID640559166 
Producthypothetical protein 
Protein accessionYP_001240303 
Protein GI148255718 
COG category[R] General function prediction only 
COG ID[COG4249] Uncharacterized protein containing caspase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGGA TCAGCCTCAT TCCAAGGCTC ATTTTGGCGC TGGTCCTGGT TACGCTTGCG 
ATCGACAGCG CATCGGCGGA CCGGCGCGTG GCCTTCGTCG TCGGCAATGG CGCTTACAAG
AACGTGGCCC AGCTTCCCAA TCCGCCGGTT GACGCCAAGG CCATGGCCGT CACCCTGCGC
AATGTCGGCT TTGACGTTGT CGAGGGTACC AATCTCAACC GCGAGCAGAT GACGGAGAAA
CTGCTCGATT TCGGCCGCCG CAGCCAGGGC GCCGACGTCG CCGTGTTTTA TTACGCCGGT
CACGGCATCG CGATTTCCGG CACCAATTAT CTGCTGCCGA TCGACGCCGA CATCAAATCG
GAGATGGACG CCAAGCTCGG CGCCGCCATC AATGTCGACG TGACGCTCGA TCAGACGCTG
GGTGACGCCA AGGTGAAGCT GGTGTTCCTC GACGCCTGCC GGGACAATCC ATTCGCGGCC
AAGATCCGGT CGAGCGCATC GACGCGCAGC GTCTCGGTGC AGACCGGCCT CGCCGAGATG
AAATCCGGCG AAGGCACGCT GATCGCGTTT GCCACGGGTC CGGGGCAGAC CGCACTGGAC
GGCGAAGCCG GCACCAACAG CCCGTTCACC AGGGCTCTGA TCGCGCACAT CACCCAGCCC
GGCCTGGAAA TCCAGCAGGC CATGACCCAG GTCCGCGCGC AGGTAAACGA GGAGACCGGC
AAGGGCCAGC TGCCATGGGG CCACACCAAC CTTATCGGCG CGGTCTATCT GAACCCGGCA
GCCGGAGGAG CGCCCGCAGG CCCGAGCGCC GGGACTGTTC CGGCGGCGGT CGCGGCGGTG
CAGCCCGCGA ACGATGTCGA GCTGGAGTTC TGGCGCTCGG TCAAGGACTC CAACAAGGCC
GAGGAGCTGA AGGCCTATCT GACCAACTAT CCCAATGGCC AGTTCAGATC GCTGGCGCTG
GCGCGGGTGG CTTCGCTCGA GAATGGCCCG TCCACCACGA CGCGCAACCT GACCACCGGC
GTCGATCCCG CGACCTTCAC CGAAGAGGGC ACCCAGGTGA CGGAGGACCA GATCGGGCTC
GACAAGGGGC AGCGCCGCGA CGTGCAGCGG CGCCTGACCG GCCTCGGCTT CGACACCAAG
GCCAGCGGCA AGTTCGACGA ACCGACCCGA GCCGTGCTCA AGCGCTGGCA GGCGGCGCGC
GGCTATCCGT CGAGCGGTTA TCTGACCAAG CTGCAGCACA AGGCCCTGCT CGCCGAGATC
ATCCCGGCCT CGGTCACGGC AAGCGCCAGC GAGGATGAGC GCCCGGCCCG CCGGACGCAG
CGCAGCAACG GTGGCGGGGG TGGTGGCCAT CATCGCGGCG GCGGTCCGGA CGCCGGCGCA
GCCTTCATCG GCGGAATGAT GGGCGGCATT CTCGGCGGCG CCTTCCGTCG CTGA
 
Protein sequence
MRGISLIPRL ILALVLVTLA IDSASADRRV AFVVGNGAYK NVAQLPNPPV DAKAMAVTLR 
NVGFDVVEGT NLNREQMTEK LLDFGRRSQG ADVAVFYYAG HGIAISGTNY LLPIDADIKS
EMDAKLGAAI NVDVTLDQTL GDAKVKLVFL DACRDNPFAA KIRSSASTRS VSVQTGLAEM
KSGEGTLIAF ATGPGQTALD GEAGTNSPFT RALIAHITQP GLEIQQAMTQ VRAQVNEETG
KGQLPWGHTN LIGAVYLNPA AGGAPAGPSA GTVPAAVAAV QPANDVELEF WRSVKDSNKA
EELKAYLTNY PNGQFRSLAL ARVASLENGP STTTRNLTTG VDPATFTEEG TQVTEDQIGL
DKGQRRDVQR RLTGLGFDTK ASGKFDEPTR AVLKRWQAAR GYPSSGYLTK LQHKALLAEI
IPASVTASAS EDERPARRTQ RSNGGGGGGH HRGGGPDAGA AFIGGMMGGI LGGAFRR