Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4352 |
Symbol | |
ID | 5152461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4569115 |
End bp | 4570575 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559165 |
Product | hypothetical protein |
Protein accession | YP_001240302 |
Protein GI | 148255717 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTTC TCACCATCAC ATTGTCCCTG CTCTGCATGG TGCTGACGGC GGAAGCCGCA CGCGCCGACC GTCGCGTCGC CTTCGTGGTC GGCAACGGCG CCTATAAGAG CGTGGCTCAG TTGCCGAACC CGCCGGTCGA CGCCAAGGCC ATGGCGGCAA CCCTGCGCAA TGTCGGCTTC GACGTGGTCG AGGGCACCAA TCTCACGCGC GACAAGATGA CCGAGAAGCT GCTCGACTTC GGCCGCAAGG CGCAGGGGGC CGACATCGCG GTGTTCTATT ACGCAGGCCA CGGCATTGCG ATCGCCGGCA CCAACTACCT CCTGCCGGTC GATGCCGACC TGAAATCGGA GATGGACGTC AAGCTGGGCT CGGCGATCAA TATCGACGTG ACACTCGATC AGACGATGGG CGACGCCAAG GTCAAGCTGG TGTTCCTCGA TGCCTGCCGC GACAACCCGT TCGCCGCCAA GATCAAGTCG AACTCACCGA CCCGCAGCGT GTCGGTGCAG ACCGGCCTCG CCGAGATGAA ATCCGGCGAG GGGACGCTGA TCGCGTTTGC GACCGGTCCC GGCCAGACCG CACTCGATGG CGATGCCGGC GCCAACAGCC CGTTCACCCG CGCGCTGATC TCGCACATCG CGCAGCCCGG CGTCGAGATC CAGCAGGCGA TGACCTCGGT GCGCGCCCAG GTCAATGAAG AGACCAACAA GGGGCAGCTG CCCTGGGGGC ATACCAACCT GATCGGCGCG GTGTATCTCA ATCCGGCCGC ATCCCCCGCC GCAACCACCG CCTCTTCCGG AACCACTCCG GCCGCCGTCG TCGCAAGTCC GGTCGCCGGC GAGGCCGAGC TTGAATTCTG GCGCTCGGTG AAGGATTCCA ACAAGCCCGA AGAGCTCAAC GCCTATCTCT CGACCTATCC GAACGGGCAG TTCAAGTCAC TGGCGATGGC GCGCATCGCG TCGATCGAGA GCGGCGCCAT CAATACCGCG ACCCGCAACG TCGCCAAGGG TGTCGATCCC GCCACCTTCA CGGAAGAAGG CACACAGGTC AGTGAGGATC AGATCGGCCT CGACAAGACC AAGCGGCGTG ACATACAGCG TCGCCTCACC GGTTTGGGCT TCGACACCAA GATGACGGGT GTGTTCGATG ACGAGACCCG CGCCGTCATG AAGCGCTGGC AGGCGGCCCG TGGCTATCCT GCGACCGGCT TCATGACCAA GCTGCAGCAC AAGGCGCTGC TGGCCGAGCC TCAGCCGGCT CCGGCGACGG CCGCGGTCGG CGACGAGGCC AAGCCCCGCC GCGCCAAGCC GGCCGGCAAT GTCGCCGCTG GCGCGCCGCC GCCGCAGGCC GCGCCGGTCT ATCGCAACCC GCCGCCGCAG GACAACGCCG GCAATGCCGC GGGCGCCGCG TTCATCGGCG GCATGATGGG TGGCGTTCTC GGCAGCGCGC TGCGTCGCTA G
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Protein sequence | MRFLTITLSL LCMVLTAEAA RADRRVAFVV GNGAYKSVAQ LPNPPVDAKA MAATLRNVGF DVVEGTNLTR DKMTEKLLDF GRKAQGADIA VFYYAGHGIA IAGTNYLLPV DADLKSEMDV KLGSAINIDV TLDQTMGDAK VKLVFLDACR DNPFAAKIKS NSPTRSVSVQ TGLAEMKSGE GTLIAFATGP GQTALDGDAG ANSPFTRALI SHIAQPGVEI QQAMTSVRAQ VNEETNKGQL PWGHTNLIGA VYLNPAASPA ATTASSGTTP AAVVASPVAG EAELEFWRSV KDSNKPEELN AYLSTYPNGQ FKSLAMARIA SIESGAINTA TRNVAKGVDP ATFTEEGTQV SEDQIGLDKT KRRDIQRRLT GLGFDTKMTG VFDDETRAVM KRWQAARGYP ATGFMTKLQH KALLAEPQPA PATAAVGDEA KPRRAKPAGN VAAGAPPPQA APVYRNPPPQ DNAGNAAGAA FIGGMMGGVL GSALRR
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