| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4286 |
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| Symbol | gabT |
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| ID | 5150655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4492040 |
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| End bp | 4493317 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559106 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001240243 |
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| Protein GI | 148255658 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.012329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCGCGA ACGAGGAACT GCTGGCACGA CGACACCAGG CCGTCGTCAG GGGCGTGAGC
TATGCGACGC CGCTGTTTGC CGACCGGGCG CTCAACAGCG AGGTCTGGGA CGTCGAAGGC
AAGCGTTACG TCGATTTCGC CGGTGGCATC GCGGTGCTGA ACACCGGCCA TTGTCATCCG
CATGTGGTGG CGGCCATCCG CGCCCAGCTC GACCGTTTCA CCCACACCTG CTTCCAGGTG
CTGCAATACG AGCCCTATGT GCGGTTGACG GAGCGGCTCA ATGCGATCGC GCCGATCTCT
GGCCCGGCCA AGTCGATCCT GCTGACGACC GGCGCGGAGG CGACCGAAAA CGCCATCAAG
ATCGCGCGGG CCGCCACCGG CCGCAGCGGC ATCATCGCCT TCACCGGCGC CTTTCATGGC
CGTACCGCGC TGGCCAATGC CATGACCGGC AAGGTGATGC CCTATAAGAA GCACTTCGGG
CCACCTTTGC CCGGAATCTG GCATGCGCCT TTCCCGATCG CCGGCAGCGG CGTCTCGGTC
GAGGATACGC TGTCCTATAT CAACTTCATC TTCAAAGCCG ACATCGACGC CTCGCAGGTC
GCTGCGATCA TCATCGAGCC GGTGCAGGGC GAGGGTGGCT TCCATCAGGC GCCGCCGGAG
CTGATGAGCG GCCTGCGCCG GCTGTGTGAC ACCCACGGCA TCGTGCTGAT CGCGGACGAG
GTGCAGACCG GCTTCGGCCG GACCGGCAAG ATGTTCGCGA TGGAGCACTA CGACGTGCAG
CCGGACGTGA TCTGCGTGGC CAAGAGCCTC GCCGGCGGCA TGCCGCTGTC GGGCGTGATC
GGCCGCGCCG CGATCATGGA TGCGGCTGAG CCGGGTGGGC TGGGCGGAAC CTATGGCGGC
AATCCGCTGG CCTGCGCGGC TGCGCTCGCC GTGCTCGACG TCTTCGAGCA GGACAAGCTG
TTGGACCGCG CCAACGCGAT CGGTGCCAGG CTCCGCGCCG CCATCAGCAA ATTCTCGCGC
GCCAATACGC TGGTTCCGAT TTCTGAGCCG CGCGGTCCTG GCGCGATGAT TGCATTCGAT
ATTCTGAAGC AGCGCGGCAG CCACGAGCCG GATGCGGAGA TGACCAAGCG CGTGACCCGC
GTGGCGTACG AGAATGGCCT CATCCTGTTG TCTTGCGGCG TGACGGCGAG CACGATCCGA
ATCCTGGTGC CGCTCACCGC GTCGGACGAG ATCGTCGACG AAGGGCTCGC GATCCTGGAG
AAGTGTCTGG CCGCCTGA
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| Protein sequence | MGANEELLAR RHQAVVRGVS YATPLFADRA LNSEVWDVEG KRYVDFAGGI AVLNTGHCHP
HVVAAIRAQL DRFTHTCFQV LQYEPYVRLT ERLNAIAPIS GPAKSILLTT GAEATENAIK
IARAATGRSG IIAFTGAFHG RTALANAMTG KVMPYKKHFG PPLPGIWHAP FPIAGSGVSV
EDTLSYINFI FKADIDASQV AAIIIEPVQG EGGFHQAPPE LMSGLRRLCD THGIVLIADE
VQTGFGRTGK MFAMEHYDVQ PDVICVAKSL AGGMPLSGVI GRAAIMDAAE PGGLGGTYGG
NPLACAAALA VLDVFEQDKL LDRANAIGAR LRAAISKFSR ANTLVPISEP RGPGAMIAFD
ILKQRGSHEP DAEMTKRVTR VAYENGLILL SCGVTASTIR ILVPLTASDE IVDEGLAILE
KCLAA
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