| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4271 |
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| Symbol | |
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| ID | 5150486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4480664 |
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| End bp | 4482742 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640559091 |
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| Product | histidine kinase |
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| Protein accession | YP_001240228 |
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| Protein GI | 148255643 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.305016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0625064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAGC AGCGTGACGG TGACTTGGCG TTTGAACAGG AGGTGGTCCA GCGCCTTGGC
CTGATGCCCA ATTTATTCCG TCCCCGGCCA TCGGCGCCGG AGACCGCCCG CACGCTGTGG
CAATTCGCGA AGAGCGCCTA TCTCGATGCG CCATTGCCTG CGCTGTTCAA GGAACGTCTC
GCCGTCCACC TGTCGCGCCT CGGCTGCGCC CGCTATTGCG TGGCCCGCCA TTTCGGCTTT
CTGGTCGGGC TGGGTCATCC CGGCGGCGAT CCCACGGTCC GGCCGGAGAC GGTCGACCGC
GCCCGCCAGT TGCTCATGCG TCCCATTGTA GATTCGGGTC GCGTCGCAGC CGCGCTGGAG
CGGATGGGGA CGGTGCGCGA GCTGCCGGAG CTTCCGGCCC CCTTCAGCGC GGCAGAGGCT
GATCTCTTCG ATGCCGCCGG GGCGCTGTTG CTGCAGACCG AACTGGCCGG GCGGGCGCGG
CTCGCGCTCG GACAGGCGCT GGGCGATCGC AGGCTGGAAC TGCTTGCCGC CTTTCTCACC
TATCTGCGCA TGGCACATTT CTGGGCCGAC GCCCACCCCG ACATCGCGCT GGACCCGGAC
GTGCTGAGCT TGATGCAATC CGATCCCGAT CTGGCCACGC AGCTGAGCTG CGCCGACGCA
AGACAGGGTC GTGATCCGGA CCTGGCTGAG CAGCACGGGC CGGCGGAGCA CATCGTCTCC
AGCGCGCACC GGCTGCAGCG GCTGCAGGAG ATCGACTCGG TCGGCGTGCT GTTCTTCGAT
CATGCCGAGG GCAGGCTGAT CGACGCCAAT GACGCCTTTC TCGCCATGAC CGGCTATTCG
CGCGAGGAGG TGCGCGGCGG ACGGCTGACC TGGCAGAGCA TGACGCCACC GGAATGGCAG
GACAGCTCCG CGACCCAGAT CGATCTTCTG CAGCGGACCG GCCGGATCGG TCCCTACGAG
AAGGAATATT TCCGCAAGAA CGGCGAACGC ACCTGGATGA TGTTCGCGGG CCGCGACCTC
GGCGACGGTA CCCTGGTCGA GTTGGCGATG AATATCGACG ATCGCAAGCG CACCGAGGCC
GCGCTGCGCG AGAGCGAGGC GCGCTTCCGC CAGTTCGGCG CGGCGTCGTC CGATGTGGTG
TGGATCCGCG ATGCCGCGAC CATGCGCTGG GAATATCTCA GTCCCGCGTT CGAGACGATG
TATGGCCTGC CGCGCGAAGC CGTGCTGCAA GGCGACCATC TCGCGGCGTG GACCGAGCTG
ATGCTGCCGG AGGACCGACC GCGCGTCCTC GAGGGGCTCG CCCGCGCCCG CCAGGGCGAG
CGCGACAGCT TCGATTTTCG CATCATCAGG CGCAGCGATG GCAGCCTGCG CTGGCTCCGC
ATCCGCAGCT TTCCGATGAT CGACGAGACC GGGCGGGTGC AGCGAATCGG CGGCATTAGC
CAGGACATCA CCGCGCTCGT GTCAGCGACC GAGCACCAGA AATTGCTGCT GGCCGAGCTG
CAGCATCGGG TTCGCAACAC GCTGGCGGTG ATCCGCTCGA TCATCCGGCG CACCGGCGAC
AGCAGCGACA GCATCGAGGA TTTTGCCAGC CATCTCGAGG GCCGCATCAC GGCGCTCTCG
CGCGTTCAGA GCGCCATCAC CCGCGATCCG TTTGCAGGTT TCGACCTCGC TCAACTGATC
GCCGACGAGC TGCGCGCCGG CGCAGCGCGT GAAGACGAGC AGTTTTCGCT GGCCGGCCCG
CCCTTGCGAA TCAGGGCCAA GGCTGCCGAA AGCATCGGCC TTGCCGTGCA TGAGCTCGTG
ACCAACGCGC TGAAATTCGG CGCCCTGACC AGGCCGCGCG GCTTCATCAG CATCGGATGG
CGGCTCGACG GCAGCGAGGA CAGCGGCTGG ATCGTGCTGG ACTGGAGCGA GACCGGCATG
TCGGGTCACC CGATCGCCGC GCATCGCCAG GGCTTTGGAA CGGTCCTGCT CGAACAGATG
CTGCCCTATG ACGTCGGGGC TCGCGTGACC AGGCGATTCG AGCCGAGCGG CCTGCGTTGC
GAGATCCGGC TGCCGGCGCG GGACATCCTC AAGCGTTGA
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| Protein sequence | MVEQRDGDLA FEQEVVQRLG LMPNLFRPRP SAPETARTLW QFAKSAYLDA PLPALFKERL
AVHLSRLGCA RYCVARHFGF LVGLGHPGGD PTVRPETVDR ARQLLMRPIV DSGRVAAALE
RMGTVRELPE LPAPFSAAEA DLFDAAGALL LQTELAGRAR LALGQALGDR RLELLAAFLT
YLRMAHFWAD AHPDIALDPD VLSLMQSDPD LATQLSCADA RQGRDPDLAE QHGPAEHIVS
SAHRLQRLQE IDSVGVLFFD HAEGRLIDAN DAFLAMTGYS REEVRGGRLT WQSMTPPEWQ
DSSATQIDLL QRTGRIGPYE KEYFRKNGER TWMMFAGRDL GDGTLVELAM NIDDRKRTEA
ALRESEARFR QFGAASSDVV WIRDAATMRW EYLSPAFETM YGLPREAVLQ GDHLAAWTEL
MLPEDRPRVL EGLARARQGE RDSFDFRIIR RSDGSLRWLR IRSFPMIDET GRVQRIGGIS
QDITALVSAT EHQKLLLAEL QHRVRNTLAV IRSIIRRTGD SSDSIEDFAS HLEGRITALS
RVQSAITRDP FAGFDLAQLI ADELRAGAAR EDEQFSLAGP PLRIRAKAAE SIGLAVHELV
TNALKFGALT RPRGFISIGW RLDGSEDSGW IVLDWSETGM SGHPIAAHRQ GFGTVLLEQM
LPYDVGARVT RRFEPSGLRC EIRLPARDIL KR
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