Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4202 |
Symbol | |
ID | 5148773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4412733 |
End bp | 4414043 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640559028 |
Product | putative N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001240165 |
Protein GI | 148255580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.415108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.44949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTCCGG CGCAGGCTCA GGGCGTGCCG GCGGCGCAGA CTCCCGCGGT AAGCGTCACG CCAGGGTTTC CGATTGCGTC CGACGCGCGT CTGGCGGGCG ATTCTCGACA GACGCGATTC GTGCTCGACC TCGACAAGGC GGTTCCGTTC CGCGCCTTTC TGCTCAGCGA GCCCTATCGC GTCGTGGTCG ACCTGCCGCA GGTTAGCTTC CATCTTCCTG CGGGGGCCGG AACCAGCGGC CGTGGCCTGG TGAAGGCATT CAGGTACGGC ATGGTCATGC CCGGCGGCTC CCGGATCGTG TTCGATCTGA CGGGGCCGGC GCGAATCGCC AACTCTTCGG TGCTGGATGC CGCCAACGGG CAGCCGCCCC GGCTCGTGCT GGAACTCGAG GAGGTCGACG AAGCGACCTT CGCGCGGGCG ATCGGCACCG ACAACCGTCC GACGCTCAAG CCCAGCTTGG CCGATTCGAG CCCTTCGGCG GCGCTGGCGG CGGCGTCTCC CAATCCGTTG GCGGTGCGCC CCCCGCCGAC CACGCCTGCA GGAGCTCCGG CGGCGCCAAA TGCGCCCGCG GACACGCGGC CGGTGGTGGT GATCGATCCG GGACATGGCG GTATCGACTA TGGAACCCAG GGCGGCGAGA TCCCGGAAAA GAATCTGGTG CTGGCGTTCG GACAGGCGCT GCGCGATCGC CTCGAGCGCG CGGGCAAGTT CCGCGTCGTC ATGACCAGGG ATGATGACAC CTTCATTCCG CTCGGCGACC GGGTCCGCAT CGCCCAGAAG CAGGGCGCGG CCCTGTTCGT GTCGATCCAT GCCGACGCGT TACCGCGCGG CGAGGGCGAT GCGCAGGGCG CGACGATCTA CACGCTGTCG GACAAGGCCT CCGACGTCGA AGCGGAGCGG CTCGCCGAGG CCGAGAACCG CGCCGACCTG ATCGGTGGCG TCAACCTGAC CGAGGAGCCA GCCGACGTGG CGGATATTCT GATCGATCTG GCCCGGCGCG AAACCCGCAC CTTTTCCAAC AGGTTCGCCC GCGTCTTGAT GAACGACATG AAGACGGCGG TGCATATGCA TAAGCGGCCG TTGAAATCGG CCGGGTTCCG CGTGCTGAAG GCGCCCGACG TGCCCTCGGT GCTGGTCGAG CTCGGCTATG TCTCGAACAA GGGCGACATG GGGAACCTGG TGTCGGAAGC CTGGCGGTCG CGCACGGCCG ACGCGATGGC CCGCGCGATC GATGTCTTCC TGACCAAACG CGTTGCAAAT GCTGGTGCCG AGCGGCCGGA GAAGCCGGCG CCCGCCCGTG CAAAGCCCTA G
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Protein sequence | MLPAQAQGVP AAQTPAVSVT PGFPIASDAR LAGDSRQTRF VLDLDKAVPF RAFLLSEPYR VVVDLPQVSF HLPAGAGTSG RGLVKAFRYG MVMPGGSRIV FDLTGPARIA NSSVLDAANG QPPRLVLELE EVDEATFARA IGTDNRPTLK PSLADSSPSA ALAAASPNPL AVRPPPTTPA GAPAAPNAPA DTRPVVVIDP GHGGIDYGTQ GGEIPEKNLV LAFGQALRDR LERAGKFRVV MTRDDDTFIP LGDRVRIAQK QGAALFVSIH ADALPRGEGD AQGATIYTLS DKASDVEAER LAEAENRADL IGGVNLTEEP ADVADILIDL ARRETRTFSN RFARVLMNDM KTAVHMHKRP LKSAGFRVLK APDVPSVLVE LGYVSNKGDM GNLVSEAWRS RTADAMARAI DVFLTKRVAN AGAERPEKPA PARAKP
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