Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4187 |
Symbol | |
ID | 5152399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4397282 |
End bp | 4398802 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640559015 |
Product | hypothetical protein |
Protein accession | YP_001240152 |
Protein GI | 148255567 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.951598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.259515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATAC GCAAGGTGGA TTTGAACGGC GACGGGATTT CCGACCTGAT CCTGCAGGAC GAGACCACCG GCGACGTGAC GACGCTGCTG ATGCAGAACG GCGCGCCGGT CAGCACGATC ACCTATCATG TCGCGGAGAC TTATCCCTCG ACCTACAAGA TCACGGGCTT CGGCGATTTC GACGGTTCAG GCACCACCGA TGTGCTGTTC CACAGCCTCA GCAACGATAT CGCGATCGAT TGGCTGACCG GCGCGAATGG CGTCGTCGTG GGCAACCCAA GTTATAATTG GATGCGGACC GGCTATGACG TCGTCGGCAC CGGCGACTAT TCCGCCGATG GAAACTCCGA TCTGCTGTGG CGCGGGGAGA CCGACGGCCA GCTGATGATG TGGCAGATGA ACAGCTCCTA CATCAAGGCC TACACGCCGC TGGGACAAAT CCCCACCAGC TACAGTATCG TCGACGGCGC CAGCGATTTC ACCGGCGACG GCAAGTCGGA CATCCTGTTC CGCGGCATGG ATGACGGCCA GACCACGCTG TGGGCGATGA ACGGCAGCGA GATCACCCAG CGCATCGACT TCGGCAAGAT CCCGACCTCC GTGAGCCTCC TCGATACCAA GGCCGATCTC AACGCCGACG GCACCCACGA CCTCCTCTGG TACGATCACG ACAGCGGCAA CGTCGTCGAA TGGCTGATGC ATGACGGCCA TCCGACGGTC AGTATCATCG GCAACGTCTC CCCCTCCGCC CATGCGACCC TGATCAGCGC CGACGGCGAC TATAATGGCG ACGGGATCTC CGACCTGCTG TGGAATGTCG GCGGCAATCT CGTGACGTGG ACGATGAACA TCCAGGGCGG CATCTTCTCG GTCGACTATG TTCACGACAG CAATGGCAAT CAGGTGCTGC TCGGCGCCAC GCAGATCGTG GAAGATGCCG TCGACACCTT CGACGGCAGC GGCCGCAGCA GCCTCGTGAT CCGCGACACC AGCACCGGCG CCGTGCAGGT CCTGTCCATG CTGGGACCGA CGGCAACGAA CGTCACCACC ATCAATGCCG GCCCGAACAG CACGGTCGCC AATGGCGCCG GCTCGGGGGT GGTCATCAAC GCGGACCAGT CTCACGCCTA TTATGGAACC GACGGCAGCG ACACATTCGT GATCCAGTCC GGCGGCGCGA CGGTGACCGG CGGCGCCGGC GACAACCTGT TTCACGTCTC CGGCTTCAAT TGGGGCGCGA CGATCACCGA CTTCAAGCCC AATGCCGATC AGCTGGTGCT GGATCACACC GCCTTCATCA ATGCCGTCGG CGCGCCGGTC TACGATCCCG GCGTGGTGTC GTTCACGTCA GGCACCGCGG GCCCCGAGGT GGGCGATGCG CGCTACCAGT TCTATTACCA GACCACGACC GGCCAACTCT GGTATGCCGA GCCGTTCGGC TCGGTCGCCA ACCAATATGA GCTGATCGCG ACGCTGCAGA ACCACCCGAC CTTGTCGAGC CATGACATCC TGCTGGCCTG A
|
Protein sequence | MSIRKVDLNG DGISDLILQD ETTGDVTTLL MQNGAPVSTI TYHVAETYPS TYKITGFGDF DGSGTTDVLF HSLSNDIAID WLTGANGVVV GNPSYNWMRT GYDVVGTGDY SADGNSDLLW RGETDGQLMM WQMNSSYIKA YTPLGQIPTS YSIVDGASDF TGDGKSDILF RGMDDGQTTL WAMNGSEITQ RIDFGKIPTS VSLLDTKADL NADGTHDLLW YDHDSGNVVE WLMHDGHPTV SIIGNVSPSA HATLISADGD YNGDGISDLL WNVGGNLVTW TMNIQGGIFS VDYVHDSNGN QVLLGATQIV EDAVDTFDGS GRSSLVIRDT STGAVQVLSM LGPTATNVTT INAGPNSTVA NGAGSGVVIN ADQSHAYYGT DGSDTFVIQS GGATVTGGAG DNLFHVSGFN WGATITDFKP NADQLVLDHT AFINAVGAPV YDPGVVSFTS GTAGPEVGDA RYQFYYQTTT GQLWYAEPFG SVANQYELIA TLQNHPTLSS HDILLA
|
| |