Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3989 |
Symbol | |
ID | 5152223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4197169 |
End bp | 4197813 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640558823 |
Product | hypothetical protein |
Protein accession | YP_001239964 |
Protein GI | 148255379 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGG CAATGATTGT ATGGGGCGGC TGGCCGGGAC ATGATCCGGA CCTCTGTGCC TCGATGATCC GCGGCTGGCT CAAGGCCGAA GGGTTCGAGG TGCAGATCGA GACCACGACC GCCGCCTTCG CTGACCCCGC GATTCACGAT CTGTCGCTGA TCATCCCGAT CTACACCATG TCTAAGATTG AGAAGGCGGA AGCACTCAAT CTCTGCGCGG CGGTGCGCAG CGGCGTCGGG CTCGCCGGGC ATCATGGCGG CATGTGCGAC GCCTTCCGCG ATTCGGTGGA CTACCAGTTT CTGTGCGGCG GGCAGTGGGT CGCACATCCC GGCAATATCA TCGATTACCG GGTCGACTTG ACCAGACCGG ACGATCCCAT CATGAAGGGC TTGAAGAGTT TCGAGCACCG GTCCGAGCAA TACTACATGC ATGTCGACCC GGCCAACGAG GTGTTGGCGA CCACGACGTT CAGCGGCGAG CACGCACCCT GGATCGAAGG TGTCGTGATG CCGGTGGTTT GGAAGAAGCG ATATGGCGCG GGCCGCGTGT TCTATTCCTC GCTTGGCCAT CGCGCCTATG AGCTCGACGT TCCGGAGATC CGCACCTTGA TGACCCGCGG CATGCTATGG GCGGCGCGCG AGTGA
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Protein sequence | MRKAMIVWGG WPGHDPDLCA SMIRGWLKAE GFEVQIETTT AAFADPAIHD LSLIIPIYTM SKIEKAEALN LCAAVRSGVG LAGHHGGMCD AFRDSVDYQF LCGGQWVAHP GNIIDYRVDL TRPDDPIMKG LKSFEHRSEQ YYMHVDPANE VLATTTFSGE HAPWIEGVVM PVVWKKRYGA GRVFYSSLGH RAYELDVPEI RTLMTRGMLW AARE
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