Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3976 |
Symbol | |
ID | 5151276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4182888 |
End bp | 4184390 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558810 |
Product | hypothetical protein |
Protein accession | YP_001239951 |
Protein GI | 148255366 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.435936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGAT CGATGCGGAC GTGGTGGGCC TGCGGACTGG TCGTGCTGAG CCTGCTTCTG GCGCCGGCCG CCCAGGCCGA GAAGCGCGTC GCCCTGGTCG TCGGCAACAA CGACTACAAA TTTGTTCCCA AGCTGCAGAA GGCCGTGAAC GACGCGCGCA CGATGGGCGA TACGTTGAAG CAGCTCGGCT TCAACGTGAT GGTTGCGGAA AATCTCAATC GGCAGCAGTT CAGCCAGGCG CTGCTGGCCT TCGACAGTGC TGTCGAGGCG GGCGACACTG CGTTCTTCTT CTATGCCGGT CATGGCTTCG AGATTGCCGG ACAGAACTTC CTGCTGCCCA CTGACGTGCC CGCGGCGACA GAGGGGCAGG AGGAATTGGT GCGCGATGCT TCGATCATGG CGGACCGCAT CATCGAGCGA TTGCAGAACA AGAAGGCGCG CACGTCGATC CTGGTGTTCG ATGCCTGCCG CAACAATCCG TTCGAGCGCG CTGGCACGCG CGCGGTCGCC GGCGGCGGCG GGTTGGCGCC GATGACGCAG TTGCCGGAGG GCGTGTTCTC GGTGTTTTCC GCAGGACCCC GGCAGACCGC GCTCGACCGG CTCTCGAACG ACGATGCCAA TCCGAACTCG GTGTTCACGC GCACCTTTGC CAAGGAGCTG ACGCAGCCCG GCGTCAATCT CGTTCAGGTC GCGCAGCGCA CGCGCCGCGT GGTCAGCGAG CTGGCCGAGA CCGTGCGGCA CAAGCAGATT CCGGTCTATT TCGACCAGAT GGTCGACGAC GTTTTCCTGA ACGGCATGGC CAAGGGATCG GCCGCAGCGG ACAACAAGCC GGCCGAGCCG CAGCAGAAGC TCGCGGCCTT GCCGCCCGTG TCGGCCCCGC GCATTCCTCC GCCCAACGAG TCGTTGAACG CGCCGATCGC GATGTTCTCG CGCCACAATG GCGGTTGGAC CGTCACCTTC TCGATCGCCG ATCCGACGCT CGGCATTTCC TGGCGCATGG GCGAAGCCGG GGAATTCCGC GAGACCGGCT TCATGGACGT GCTGGATCCG CGCACGCGCA AGCGCATGCC CAATCCCTCG ATCCAGCTTC CCGCCGATGC GCCGGCCGGC ACGATCGAGG TCCGCTATGT TGACGCGGGT GGCGAGATGC AGGGGCCGTT TCCGATCCGC TTCGAGCCGG AAGCGGCGCT GGTGCGTGAC CAGCGCAAGA TCCTCGACAT GACGGCGACC AGCTGGCTGT CGTTCCGCGA GTTCAACGGC CTGCTCGTCT ACTACACCCA CCTGATGTCG TATCGGTGCG CCATCCGCGA GGTGCGCATC GGCATCGACA GCGCCGTGCC CGACAAGGTG TTGAGCATGC CGGGTTGCGA CATGAAGGAC CCGATCGCGA TTCCCTCGAA TGCCACGCCC TATCTGAAGC TGCCGCCCGC GACGAAATTC GTTTCGGTCG AGCTCACCTA TCGCGACGGC AGCGTTTCGG AGATCAAGAG CTTCCGGCGC TGA
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Protein sequence | MMRSMRTWWA CGLVVLSLLL APAAQAEKRV ALVVGNNDYK FVPKLQKAVN DARTMGDTLK QLGFNVMVAE NLNRQQFSQA LLAFDSAVEA GDTAFFFYAG HGFEIAGQNF LLPTDVPAAT EGQEELVRDA SIMADRIIER LQNKKARTSI LVFDACRNNP FERAGTRAVA GGGGLAPMTQ LPEGVFSVFS AGPRQTALDR LSNDDANPNS VFTRTFAKEL TQPGVNLVQV AQRTRRVVSE LAETVRHKQI PVYFDQMVDD VFLNGMAKGS AAADNKPAEP QQKLAALPPV SAPRIPPPNE SLNAPIAMFS RHNGGWTVTF SIADPTLGIS WRMGEAGEFR ETGFMDVLDP RTRKRMPNPS IQLPADAPAG TIEVRYVDAG GEMQGPFPIR FEPEAALVRD QRKILDMTAT SWLSFREFNG LLVYYTHLMS YRCAIREVRI GIDSAVPDKV LSMPGCDMKD PIAIPSNATP YLKLPPATKF VSVELTYRDG SVSEIKSFRR
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