Gene BBta_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3976 
Symbol 
ID5151276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4182888 
End bp4184390 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content65% 
IMG OID640558810 
Producthypothetical protein 
Protein accessionYP_001239951 
Protein GI148255366 
COG category[R] General function prediction only 
COG ID[COG4249] Uncharacterized protein containing caspase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.435936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAT CGATGCGGAC GTGGTGGGCC TGCGGACTGG TCGTGCTGAG CCTGCTTCTG 
GCGCCGGCCG CCCAGGCCGA GAAGCGCGTC GCCCTGGTCG TCGGCAACAA CGACTACAAA
TTTGTTCCCA AGCTGCAGAA GGCCGTGAAC GACGCGCGCA CGATGGGCGA TACGTTGAAG
CAGCTCGGCT TCAACGTGAT GGTTGCGGAA AATCTCAATC GGCAGCAGTT CAGCCAGGCG
CTGCTGGCCT TCGACAGTGC TGTCGAGGCG GGCGACACTG CGTTCTTCTT CTATGCCGGT
CATGGCTTCG AGATTGCCGG ACAGAACTTC CTGCTGCCCA CTGACGTGCC CGCGGCGACA
GAGGGGCAGG AGGAATTGGT GCGCGATGCT TCGATCATGG CGGACCGCAT CATCGAGCGA
TTGCAGAACA AGAAGGCGCG CACGTCGATC CTGGTGTTCG ATGCCTGCCG CAACAATCCG
TTCGAGCGCG CTGGCACGCG CGCGGTCGCC GGCGGCGGCG GGTTGGCGCC GATGACGCAG
TTGCCGGAGG GCGTGTTCTC GGTGTTTTCC GCAGGACCCC GGCAGACCGC GCTCGACCGG
CTCTCGAACG ACGATGCCAA TCCGAACTCG GTGTTCACGC GCACCTTTGC CAAGGAGCTG
ACGCAGCCCG GCGTCAATCT CGTTCAGGTC GCGCAGCGCA CGCGCCGCGT GGTCAGCGAG
CTGGCCGAGA CCGTGCGGCA CAAGCAGATT CCGGTCTATT TCGACCAGAT GGTCGACGAC
GTTTTCCTGA ACGGCATGGC CAAGGGATCG GCCGCAGCGG ACAACAAGCC GGCCGAGCCG
CAGCAGAAGC TCGCGGCCTT GCCGCCCGTG TCGGCCCCGC GCATTCCTCC GCCCAACGAG
TCGTTGAACG CGCCGATCGC GATGTTCTCG CGCCACAATG GCGGTTGGAC CGTCACCTTC
TCGATCGCCG ATCCGACGCT CGGCATTTCC TGGCGCATGG GCGAAGCCGG GGAATTCCGC
GAGACCGGCT TCATGGACGT GCTGGATCCG CGCACGCGCA AGCGCATGCC CAATCCCTCG
ATCCAGCTTC CCGCCGATGC GCCGGCCGGC ACGATCGAGG TCCGCTATGT TGACGCGGGT
GGCGAGATGC AGGGGCCGTT TCCGATCCGC TTCGAGCCGG AAGCGGCGCT GGTGCGTGAC
CAGCGCAAGA TCCTCGACAT GACGGCGACC AGCTGGCTGT CGTTCCGCGA GTTCAACGGC
CTGCTCGTCT ACTACACCCA CCTGATGTCG TATCGGTGCG CCATCCGCGA GGTGCGCATC
GGCATCGACA GCGCCGTGCC CGACAAGGTG TTGAGCATGC CGGGTTGCGA CATGAAGGAC
CCGATCGCGA TTCCCTCGAA TGCCACGCCC TATCTGAAGC TGCCGCCCGC GACGAAATTC
GTTTCGGTCG AGCTCACCTA TCGCGACGGC AGCGTTTCGG AGATCAAGAG CTTCCGGCGC
TGA
 
Protein sequence
MMRSMRTWWA CGLVVLSLLL APAAQAEKRV ALVVGNNDYK FVPKLQKAVN DARTMGDTLK 
QLGFNVMVAE NLNRQQFSQA LLAFDSAVEA GDTAFFFYAG HGFEIAGQNF LLPTDVPAAT
EGQEELVRDA SIMADRIIER LQNKKARTSI LVFDACRNNP FERAGTRAVA GGGGLAPMTQ
LPEGVFSVFS AGPRQTALDR LSNDDANPNS VFTRTFAKEL TQPGVNLVQV AQRTRRVVSE
LAETVRHKQI PVYFDQMVDD VFLNGMAKGS AAADNKPAEP QQKLAALPPV SAPRIPPPNE
SLNAPIAMFS RHNGGWTVTF SIADPTLGIS WRMGEAGEFR ETGFMDVLDP RTRKRMPNPS
IQLPADAPAG TIEVRYVDAG GEMQGPFPIR FEPEAALVRD QRKILDMTAT SWLSFREFNG
LLVYYTHLMS YRCAIREVRI GIDSAVPDKV LSMPGCDMKD PIAIPSNATP YLKLPPATKF
VSVELTYRDG SVSEIKSFRR