| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3944 |
|---|
| Symbol | |
|---|
| ID | 5151055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4138611 |
|---|
| End bp | 4139270 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640558779 |
|---|
| Product | putative protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_001239920 |
|---|
| Protein GI | 148255335 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.390852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.255906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCCT TCGCGACGGC GCGTCAGAAA ATGGTCGATG GCCAGGTGCG CACCAACGAC
GTTACCGACC ACCGTGTGTT GGATGCGATG CTGACGGTGC CGCGCGAGAA CTTCGTCCCG
TCGGACCGGC AGGCGCTGGC CTATCTCGAC CAGAATCTCA ACGTGTCGGA AGCCGGCTCG
GCCCAGCGCT TCCTGATCAC CCCCATGCTG ACGGGTAAGC TGCTTCAGGC CGCCGAGATC
AAGCCGACCG ATCACGTGCT CGTGGTCGGG TGCGCGACGG GCTACCTTGC CGCGCTTGCG
GCGAAGCTTG CGGCCAGCGT GGTCGCGACC GATCCGGACC CAGCTCTCGA GGGGCGCGCC
AAGCAGCTGC TGGCCGGCAT CGCGAGTGTC TCTGTTCGCG TCGCGCCTGC CGTGCAGGGC
GATCCGGCCG ATGGTCGCTT CGACGTGATT CTTCTCAACG GGGCGACCGA GATCGCGGTC
GATGGGCTGT GCCGCCAGCT CAAGGAAGGC GGTCGCCTGG TCGGCGTCTC CGCGAAGACC
AAGCCGGCCC GTGCCATCAT CTTTACGCGA TCCCATGGTG AAGTGGGCAG CAGGACCCTG
TTCGACGCTG CGGCACCGAT CCTTCCTGGT CTCGAGCAGG TCCCCGAGTT CGTTTTCTAA
|
|---|
| Protein sequence | MLPFATARQK MVDGQVRTND VTDHRVLDAM LTVPRENFVP SDRQALAYLD QNLNVSEAGS
AQRFLITPML TGKLLQAAEI KPTDHVLVVG CATGYLAALA AKLAASVVAT DPDPALEGRA
KQLLAGIASV SVRVAPAVQG DPADGRFDVI LLNGATEIAV DGLCRQLKEG GRLVGVSAKT
KPARAIIFTR SHGEVGSRTL FDAAAPILPG LEQVPEFVF
|
|---|
| |