Gene BBta_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3781 
Symbol 
ID5150815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3960626 
End bp3961270 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID640558620 
ProductTetR family transcriptional regulator 
Protein accessionYP_001239764 
Protein GI148255179 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAGG TCGATCCGGT CAAGCATGAG CAGAAGCGGC AGGAGATACT CCAGGCCGCC 
CTGTCCTGCT TCGTCAGGGA CGGATTTCAC GGCGCCAGCA CCACTGACAT CTGCGCCGCG
GCCAAGATCA GCCCCGGTCA CCTCTATCAC TACTTCGGCA GCAAGGAGGC CATCATCGAG
GCCCTCGTTC AGCACAGCCT CGCGCATGCG GCATCGCGAT TCGAAGCGAT CCTGGCCTCC
CCCGACGTCA TCGAGGCGTT CCTGATGGAG CTCGAGACGA CGAGCATCCG CCGTCGCGAA
GCCCAGGTTC TCAGCGCCGA GGCGCTGGCC GAGGCCTGCC GCAATCCGAG CTTCGCCCGC
ATCGTCCAGG ACCAGGGCCG CGGCATCCGG CGGCTGCTGG TGGATTTCCT TGCGAAGGCC
CAGCAGCGCG GCGACGTCGA TCCCGGCCTC GATCCCGAAG CAACCGCGAA CATCCTGGTT
GCGATCGTCG ACGGCGCGCG CGCACTGCCG ATCCGCAATC CCGCGGCTGA CATCAAGCAG
AGCACGGACC ATCTTCGTAT CATGATCACG CGCTTCCTCA GGCCGCCCGC AAGGCGGGAG
CCTGCTCCTG CAGACGCGCA GCGCCCGGAG GGCGGCGGCA ATTGA
 
Protein sequence
MRKVDPVKHE QKRQEILQAA LSCFVRDGFH GASTTDICAA AKISPGHLYH YFGSKEAIIE 
ALVQHSLAHA ASRFEAILAS PDVIEAFLME LETTSIRRRE AQVLSAEALA EACRNPSFAR
IVQDQGRGIR RLLVDFLAKA QQRGDVDPGL DPEATANILV AIVDGARALP IRNPAADIKQ
STDHLRIMIT RFLRPPARRE PAPADAQRPE GGGN