| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3778 |
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| Symbol | |
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| ID | 5155868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3956720 |
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| End bp | 3957988 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640558617 |
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| Product | putative tetracycline-efflux transporter |
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| Protein accession | YP_001239761 |
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| Protein GI | 148255176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGACA CCGAGCTGGC GAGTTCCGAC GGCGTACCGT CGCCGCAGGC CCCGCGCCGC
GGCGCCGTCG CTTTCATCTT CGTCACCATC CTGCTCGATA TGCTCGCGCT CGGGCTGATC
ATGCCGATCC TGCCCAAGCT GATCGAGAGC TTCGTCGCCA ATGACACCGC GCAGGCAGCA
CGGATCTTCG GCCTGTTCGG CACGGCCTGG GCACTGATGC AGTTCGTGTT CTCGCCGGTG
CTCGGCAGCC TCTCCGACCG GTTCGGCCGG CGGCCGGTCA TCCTGCTCTC GAACTTCGGC
CTCGCCGCGG ACTACGTGCT GATGGCGATG GCGCCGTCGC TGGCGTGGCT GTTCATTGGC
CGGCTGATCT CCGGCATCAC CTCGGCCAGC ATTTCCACGG CCTTTGCCTA CATCGCCGAC
CTCACGCCGC CAGAGCGGCG CGCCGCGATC TTCGGCCGCA TGGGAGCGGC GTTCGGCGCC
GGCTTCGTGC TCGGCCCGGC GACCGGCGGA TTGCTGGGCG ATATCGATCC GCGGCTGCCG
TTCTGGGCGG CCGCCGGACT CAGCTTCGTC AATGCGGTCT ATGGATTGTT GGTGCTGCCG
GAATCGCTGG GGCACGAGCG GCGCAGTCCG TTCCGCTGGC GGACCGCGAA CCCGCTCGGC
GCACTGCAAT TGCTGCGCTC CGACCGCATG CTGGCCGGGC TGTCCATGGT CAACTTCATC
ACCCAGCTCG CCCATGTCGT GCTGCCGTCG ACCTTCGTGC TCTACGCCAC CTACCGCTAT
GGCTGGGATA CGCGCACGGT CGGCCTGACG CTGGCGATCG TCGGCGTGTG CGCCATGGTG
GTGCAGGGCG GGGCGGTCGG CTGGATCGTG CGTTCGCTCG GCGAGCGTGG CGCCTTGCTG
CTCGGCCTGT GCAGCGGCAC GCTGGGCTTT CTGATCTTTG GCCTCGCGCC GACCGGGATG
CTGAGCTGGC TCGGCATTCC TGCGATGGCG CTCTGGGGCG TCTCCGGCGC GGCGATCCAG
GCGCTGATGA CACGGCTGGT GCCGGCGGAC CGGCAGGGCC AGCTGCAGGG CGCGACGTCG
AGCGTGCAGA GCATGGCCCA GCTCGCCGGG CCGTTCCTGT TCACGCTGAC CTTCGCCTAT
TTCATCGGAG TCACCGCGCC GGTGCATCTG CCCGGCGCGC CGTTCCTGCT GGCGTCGATG
CTGTTGGTCG TCGCGCTCGC GATCGCGCTG CGGACGATCC GCGCCGCGAC AGCCGCAGCC
TTATCCTGA
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| Protein sequence | MVDTELASSD GVPSPQAPRR GAVAFIFVTI LLDMLALGLI MPILPKLIES FVANDTAQAA
RIFGLFGTAW ALMQFVFSPV LGSLSDRFGR RPVILLSNFG LAADYVLMAM APSLAWLFIG
RLISGITSAS ISTAFAYIAD LTPPERRAAI FGRMGAAFGA GFVLGPATGG LLGDIDPRLP
FWAAAGLSFV NAVYGLLVLP ESLGHERRSP FRWRTANPLG ALQLLRSDRM LAGLSMVNFI
TQLAHVVLPS TFVLYATYRY GWDTRTVGLT LAIVGVCAMV VQGGAVGWIV RSLGERGALL
LGLCSGTLGF LIFGLAPTGM LSWLGIPAMA LWGVSGAAIQ ALMTRLVPAD RQGQLQGATS
SVQSMAQLAG PFLFTLTFAY FIGVTAPVHL PGAPFLLASM LLVVALAIAL RTIRAATAAA
LS
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