| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3735 |
|---|
| Symbol | |
|---|
| ID | 5154698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3912822 |
|---|
| End bp | 3913823 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640558573 |
|---|
| Product | putative branched-chain amino acid ABC transporter, permease protein |
|---|
| Protein accession | YP_001239719 |
|---|
| Protein GI | 148255134 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGC AGTCGAGCGG CGCGGCACCG GCGCTTCCGC AGGCGCAGCG CGTCATGGCG
GCGATCGCCG ACCATCGCGT CCTGGTGTCG CTGGTGGCGC TGGCCCTGTT GCCCTGGCTG
CTGCCGTCGA AGGCGCTGGC CGTCAACGTG CTGATCTATG GCGTCGTGGT GATGGGGTAT
AATCTCCTGT TCGGCTATAC CGGGCTGCTG TCGTTCGGCC ATGCCGCCTT CTTCGGAACG
GGTGCGTATC TCACTGGCAT CGCCATCGGC CGCTTCGGGC TGCCGTGGTT CGCCGCGGTG
CCGCTGGCGA TTGCGGCCAG CACCGCGCTC GCCGCCGCGA TCGGCACCAT CTCAACGCGG
ACCCGTGGCA TCTATTTCTC GATGGTGACG CTGGCGCTGG CGCAGCTGGT CTATTACGTC
GCCTTGCAGG CGTCGTCATG GACGGGGGGC GAGAACGGGC TGCGCGGCTT CACCGTCGAT
CACGTCAATC TGCTCGGCCT GCAGATCAAT TTTCTCGATC CGGTCAACAA ATATTACGTC
CTGATGGCGT TTGCGGCGCT GGCGATCTGG GCCCAGTCGC GCATTCTCAA TTCGCCTTTC
GGCGCGGTGA TCGAGGCGAT CCGGGAGAAT GAGCAGCGCG CACGGGCGTG CGGCTACGAC
GTCGAACGCT GCAAGCTGAT CGTGTTCATG CTGTCGGGCG CGATCTCCGC GATCGGCGGC
TGCATGTCGG CATTGCACCT GTCGATCGTG CCGCTCGACA TCCTGCATTA TCAGACATCC
GGCATGATCG TGATGATGGT GCTGCTCGGC GGCGCCCGCA GCTTCTTCGG GCCGTTCATC
GGCGCCGCGG TGTTCCTGAT CCTGGAAGAC GTCGTCTCGA TCTGGACGCC GCATTGGCAG
ATCGTCGTCG GCGCGATCTT TGTCGGCTTC GTTCTGTTCC TGCCGAAGGG CATCTGGGGC
ACGTTGCTGG ACCTGCTGCC GGCGGCGAGG GAGCGGCGAT GA
|
|---|
| Protein sequence | MAMQSSGAAP ALPQAQRVMA AIADHRVLVS LVALALLPWL LPSKALAVNV LIYGVVVMGY
NLLFGYTGLL SFGHAAFFGT GAYLTGIAIG RFGLPWFAAV PLAIAASTAL AAAIGTISTR
TRGIYFSMVT LALAQLVYYV ALQASSWTGG ENGLRGFTVD HVNLLGLQIN FLDPVNKYYV
LMAFAALAIW AQSRILNSPF GAVIEAIREN EQRARACGYD VERCKLIVFM LSGAISAIGG
CMSALHLSIV PLDILHYQTS GMIVMMVLLG GARSFFGPFI GAAVFLILED VVSIWTPHWQ
IVVGAIFVGF VLFLPKGIWG TLLDLLPAAR ERR
|
|---|
| |