Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3676 |
Symbol | |
ID | 5154292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3840471 |
End bp | 3841754 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558516 |
Product | sulfur dehydrogenase subunit SoxC |
Protein accession | YP_001239662 |
Protein GI | 148255077 |
COG category | [R] General function prediction only |
COG ID | [COG2041] Sulfite oxidase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.229371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAAGG ACAAATCAGT TTCCTCACTC CCGCGCGCCT CGCGCCGCGG TTTCCTGACC GCCGCCGGTG GCCTCGCGGC CACTGCGATC GCCGCGCCGG CCCGCGCCGG CGCAGGCAAT CCGGCCAACC AGCCGCCGAA CGTACCGGAA TGGACGCGTA CCCTCGGCGA GGGCGTGGCC GTGCGTCCCT ACGGCAAGCC GTCGAAATTC GAGAAGGACG TCGTCCGGCG CGACGTCGAA TGGCTGACAG CCTCGCGGGA ATCCTCGGTC AGCTTCACGC CGCTGCATGA GCTCGAAGGC ATCATCACGC CGAACGGGCT GTGCTTCGAG CGCCATCACG GCGGCGTGGC CGATGTCGAT CCGGCCGATC ACCGACTGAT GATCCATGGC CTGGTCGAGC GGCCGCTGCT GCTTTCGCTC GACGAGCTCA AGCGCTTTCC GCGCGTCAAC CGCATCCACT TCATGGAATG CGCGGCGAAT TCCGGCATGG AATGGCGCGG CGCCCAGCTC AATGGCTGCC AGTTCACGCA TGGCATGATC CACTGCGTGC AATACACCGG CGTCTCGCTG CGGACGCTGC TGGAAGAGGC CGGCGTCAAG TCCAGCGGCA AGTGGCTGCT GGTGGAGGGC GCCGATTCCG CCGCGATGGA TCGCAGCCTG CCGACCGAGA AGGCGCTCGA CGACTGCATC ATCGCCTACA AGATGAATGG CGAGGCGCTG TATCCCGAGC AGGGCTATCC GATGCGTCTG GTGGTGCCGG GATGGCAGGG TAATCTCTGG GTCAAGTGGC TGCGCCGCAT CGAGGTCGGC GACCAGCCCT GGCACACCCG CGAGGAGACC TCGAAGTACA CGGATCTGCT ACCAAATGGC AAGGCGCGGC GCTTCACTTG GTCCATGGAT GCGAAGTCGG TGATCACGAG CCCGAGCCCG CAGGCGCCGA TCAAGCACGG CAAGGGGTTC ACCATCGTCT CGGGCCTGGC CTGGTCGGGC AACGGCAAGG TCAAGCGCGT CGACGTGTCG CTCGATGGTG GCCGCAGCTG GTGGCCGGCG CGGCTCGACG GCCCGGTGCT CGATAAGGCG CTGACCCGCT TCTACTACGA GTTCGACTGG AACGGCGAGT CGCTGCTGCT GCAGTCGCGG GTGCAGGACG AGACCGGCTA TGTGCAGCCG TCCAAGGCCG AGCTGCGCAA GGTGCGCGGC TACAACTCCA TCTATCACAA CAATGGCATC CAGACCTGGC ACGTGCAGGC AAATGGTGAG GTCGAGAATG TCGAGGTCGC CTAA
|
Protein sequence | MSKDKSVSSL PRASRRGFLT AAGGLAATAI AAPARAGAGN PANQPPNVPE WTRTLGEGVA VRPYGKPSKF EKDVVRRDVE WLTASRESSV SFTPLHELEG IITPNGLCFE RHHGGVADVD PADHRLMIHG LVERPLLLSL DELKRFPRVN RIHFMECAAN SGMEWRGAQL NGCQFTHGMI HCVQYTGVSL RTLLEEAGVK SSGKWLLVEG ADSAAMDRSL PTEKALDDCI IAYKMNGEAL YPEQGYPMRL VVPGWQGNLW VKWLRRIEVG DQPWHTREET SKYTDLLPNG KARRFTWSMD AKSVITSPSP QAPIKHGKGF TIVSGLAWSG NGKVKRVDVS LDGGRSWWPA RLDGPVLDKA LTRFYYEFDW NGESLLLQSR VQDETGYVQP SKAELRKVRG YNSIYHNNGI QTWHVQANGE VENVEVA
|
| |