Gene BBta_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3579 
Symbol 
ID5152020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3738990 
End bp3740135 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID640558429 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001239575 
Protein GI148254990 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.740274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCG CTCTCGACGA GGAACAGATC GCGGTGCGCG ACATGGCGCG CGCCTTCGCG 
GCCGAGAAGA TCGCCCCGCA TGCGTTGCGC TGGGACGAGG AGAAGCACTT TCCCGTCGAC
GTGATGCGCC AAGCCGCGGC GCTCGGCATG GGCGGCATCT ACATCCGCGA TGATGTCGGC
GGCTCGGGCC TGACCCGTCT CGACGCGGCG CTGATCTTCG AGGCCCTGGC GACCGGCTGT
CCGACGGTCT CGGCCTTCAT TTCGATCCAC AACATGGCGT CGTGGATGAT CGACACGTTC
GGCACCGAGG CGCAGCGTCA GGCCTATCTG CCGAAGCTTT GCGCCATGGA TCTGATCGCG
AGCTATTGCC TGACCGAGCC GGGCGCCGGC TCGGACGCCG CCGCGCTGCG CACCCGCGCG
GTGCGCGACG GCGACGACTA CGTCCTCAAC GGCCAGAAGC AGTTCATCTC CGGCGCCGGC
GCGACCGACA TTCTCGTCGC GATGGTGCGC ACCGGTGCCG ATGGCCCCGG CGGCATCTCG
ACCCTGGTGA TCGATGCGAA GACCCCGGGC GTGTCGTTCG GCGCCAATGA GCGCAAGATG
GGCTGGAACG CGCAGCCGAC CCGCGCCGTG ATCTTCGAGA ATGCGCGCGT GCCCGTCGCC
AACCGGCTCG GCGAGGAAGG CATCGGCTTC AAGATCGCGA TGGCCGGCCT CGACGGCGGT
CGGCTCAACA TCGCGGCGTG CTCGCTCGGA GGCGCGCAGA GCGCGCTCGA CAAGACCCTT
GCCTACACGA AGGAGCGCAA GGCCTTCGGC AAGCGGCTCG ACGAATTCCA GGCGCTGCAG
TTTCGCATCG CCGACATGGC AATCGAGCTG GAAGCGGCAC GCACCTTCGT CTGGCGTGCC
GCCGCCGCGC TCGACCGCAA GGATGCTGAC GCCACCATGC TGTGCGCGAT GGCCAAGCGC
TTCGGCACCG ATGTCGGCTT CGAGGTCGCC AACCAGGCGC TGCAGCTGCA TGGCGGCTAC
GGCTATCTGA GCGAATACGG CATCGAGAAG ATCGTGCGCG ATCTGCGCGT GCACCAGATC
CTCGAAGGGA CCAACGAGAT CATGCGTCTG ATCGTGTCCC GCAAGCTGAT CGAGGGCGCG
CGATGA
 
Protein sequence
MHFALDEEQI AVRDMARAFA AEKIAPHALR WDEEKHFPVD VMRQAAALGM GGIYIRDDVG 
GSGLTRLDAA LIFEALATGC PTVSAFISIH NMASWMIDTF GTEAQRQAYL PKLCAMDLIA
SYCLTEPGAG SDAAALRTRA VRDGDDYVLN GQKQFISGAG ATDILVAMVR TGADGPGGIS
TLVIDAKTPG VSFGANERKM GWNAQPTRAV IFENARVPVA NRLGEEGIGF KIAMAGLDGG
RLNIAACSLG GAQSALDKTL AYTKERKAFG KRLDEFQALQ FRIADMAIEL EAARTFVWRA
AAALDRKDAD ATMLCAMAKR FGTDVGFEVA NQALQLHGGY GYLSEYGIEK IVRDLRVHQI
LEGTNEIMRL IVSRKLIEGA R