Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3579 |
Symbol | |
ID | 5152020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3738990 |
End bp | 3740135 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640558429 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001239575 |
Protein GI | 148254990 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.740274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTTCG CTCTCGACGA GGAACAGATC GCGGTGCGCG ACATGGCGCG CGCCTTCGCG GCCGAGAAGA TCGCCCCGCA TGCGTTGCGC TGGGACGAGG AGAAGCACTT TCCCGTCGAC GTGATGCGCC AAGCCGCGGC GCTCGGCATG GGCGGCATCT ACATCCGCGA TGATGTCGGC GGCTCGGGCC TGACCCGTCT CGACGCGGCG CTGATCTTCG AGGCCCTGGC GACCGGCTGT CCGACGGTCT CGGCCTTCAT TTCGATCCAC AACATGGCGT CGTGGATGAT CGACACGTTC GGCACCGAGG CGCAGCGTCA GGCCTATCTG CCGAAGCTTT GCGCCATGGA TCTGATCGCG AGCTATTGCC TGACCGAGCC GGGCGCCGGC TCGGACGCCG CCGCGCTGCG CACCCGCGCG GTGCGCGACG GCGACGACTA CGTCCTCAAC GGCCAGAAGC AGTTCATCTC CGGCGCCGGC GCGACCGACA TTCTCGTCGC GATGGTGCGC ACCGGTGCCG ATGGCCCCGG CGGCATCTCG ACCCTGGTGA TCGATGCGAA GACCCCGGGC GTGTCGTTCG GCGCCAATGA GCGCAAGATG GGCTGGAACG CGCAGCCGAC CCGCGCCGTG ATCTTCGAGA ATGCGCGCGT GCCCGTCGCC AACCGGCTCG GCGAGGAAGG CATCGGCTTC AAGATCGCGA TGGCCGGCCT CGACGGCGGT CGGCTCAACA TCGCGGCGTG CTCGCTCGGA GGCGCGCAGA GCGCGCTCGA CAAGACCCTT GCCTACACGA AGGAGCGCAA GGCCTTCGGC AAGCGGCTCG ACGAATTCCA GGCGCTGCAG TTTCGCATCG CCGACATGGC AATCGAGCTG GAAGCGGCAC GCACCTTCGT CTGGCGTGCC GCCGCCGCGC TCGACCGCAA GGATGCTGAC GCCACCATGC TGTGCGCGAT GGCCAAGCGC TTCGGCACCG ATGTCGGCTT CGAGGTCGCC AACCAGGCGC TGCAGCTGCA TGGCGGCTAC GGCTATCTGA GCGAATACGG CATCGAGAAG ATCGTGCGCG ATCTGCGCGT GCACCAGATC CTCGAAGGGA CCAACGAGAT CATGCGTCTG ATCGTGTCCC GCAAGCTGAT CGAGGGCGCG CGATGA
|
Protein sequence | MHFALDEEQI AVRDMARAFA AEKIAPHALR WDEEKHFPVD VMRQAAALGM GGIYIRDDVG GSGLTRLDAA LIFEALATGC PTVSAFISIH NMASWMIDTF GTEAQRQAYL PKLCAMDLIA SYCLTEPGAG SDAAALRTRA VRDGDDYVLN GQKQFISGAG ATDILVAMVR TGADGPGGIS TLVIDAKTPG VSFGANERKM GWNAQPTRAV IFENARVPVA NRLGEEGIGF KIAMAGLDGG RLNIAACSLG GAQSALDKTL AYTKERKAFG KRLDEFQALQ FRIADMAIEL EAARTFVWRA AAALDRKDAD ATMLCAMAKR FGTDVGFEVA NQALQLHGGY GYLSEYGIEK IVRDLRVHQI LEGTNEIMRL IVSRKLIEGA R
|
| |