| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3575 |
|---|
| Symbol | atoB |
|---|
| ID | 5151529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3734212 |
|---|
| End bp | 3735399 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640558425 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001239571 |
|---|
| Protein GI | 148254986 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.313168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.776958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGT CCGATCCCGT CGTGATCCTG TCTGCCGCTC GTACCCCGCT CGGCCGCTTC
ATCGGCGAGT TGTCCCCGCT GAGCGCGCAC AAGCTCGGTG CGCATGTGAT CCGAGCCGCG
ATCGAACGCG CGACCATTGC GCCCGACGCG GTCCAGGAGA TCTTCATGGG CAACGTCCTG
CCCGCCGGTC AGGGCCAGGC TCCAGCGCGA CAGGCGGCGC GCGGCGCCGG CCTGCCGGAT
GCGACGGGCG CTACGACGAT CAACAAGGTC TGCGGCTCCG GCATGAAGGC GACTATGCTG
GCGCACGACA TCATCACGGC CGGCTCGGCC GAGATCGTCG TGTCCGGCGG CATGGAGAGC
ATGAGCAATG CTCCCTATCT GCTGACCAAG GCCCGCAGCG GCTATCGCGC GGGGCACGAT
CGCATCCTCG ACCACATGCT GCTGGACGGA CTTGAGGACG CCTACGAGTC CGGGCGCTCG
ATGGGCGATT TCGGCGAGGC GACGGCAGAA GCCTACCAGT TCAGCCGCGC CGATCAGGAT
GCCTACGCGA TCGAGACCCT GACACGAGCG CGCCAGGCCG TCGAGAGCGG CGCATTCAAG
GCCGAGATCG CACCGATCAC CCTGACGGAG AAAGCCGGCC CTCGCCTGAT CGCCAATGAC
GAACACCCGC TCAAGGTCGA TCCCGCGAAA ATCCCGACGC TGAAGCCGGC GTTCCGCAAG
GACGGCACGA TCACGCCAGC GGCCTCCTCG GCCAATGCCG ACGGCGCCGC AGCGCTCGTG
CTCGCGACCC GATCCCGCGC CGTGCGCGAC GGACTGCCTG TCATCGCCGA GATCAAGGGT
CATGCGACGC ACAGCCAGGA GCCGCAATGG TTCACGACGG CGCCGATCCC CGCGATCCGG
AAGCTGCTCG ACAAGGTCGG CTGGCGCGTC GAGGACGTCG ATCTGTTCGA AATCAACGAG
GCCTTTGCCG TCGTCGCGAT GGCAGCGCAG CGCGATCTCG GCATCCCCCG CGACCGTCTG
AACGTCAATG GCGGCGCCTG CGCGCTCGGC CACCCGATCG GCGCCACCGG CGCACGCCTG
ATCGTGACGC TGCTGCATGC GATGGAGGCC CGCGGCCTCA AGCGCGGCGT GGCATCGCTG
TGCATCGGCG GCGGTGAGGC GACCGCCATC GCGGTGGAGC GTCCGTGA
|
|---|
| Protein sequence | MASSDPVVIL SAARTPLGRF IGELSPLSAH KLGAHVIRAA IERATIAPDA VQEIFMGNVL
PAGQGQAPAR QAARGAGLPD ATGATTINKV CGSGMKATML AHDIITAGSA EIVVSGGMES
MSNAPYLLTK ARSGYRAGHD RILDHMLLDG LEDAYESGRS MGDFGEATAE AYQFSRADQD
AYAIETLTRA RQAVESGAFK AEIAPITLTE KAGPRLIAND EHPLKVDPAK IPTLKPAFRK
DGTITPAASS ANADGAAALV LATRSRAVRD GLPVIAEIKG HATHSQEPQW FTTAPIPAIR
KLLDKVGWRV EDVDLFEINE AFAVVAMAAQ RDLGIPRDRL NVNGGACALG HPIGATGARL
IVTLLHAMEA RGLKRGVASL CIGGGEATAI AVERP
|
|---|
| |