Gene BBta_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3503 
Symbol 
ID5150660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3653637 
End bp3654239 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID640558355 
Producthypothetical protein 
Protein accessionYP_001239502 
Protein GI148254917 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA TCCGCACCGT CTGCGTCTAT TGCGGCTCCG GCCCGGGGAC GAATCCCAGC 
TTTATCGAAT CAGCCAAGGC GCTCGGCAAG GCGTTTGCCG AGAGCGGCGT CAGGCTCGTC
TATGGTGGCG GCTCCGTCGG CATGATGGGC GCCGTCGCCA AGGCCGTGCT GGATCATGGT
GGCGAGGTGA CCGGCATCAT TCCGGACTTC CTAGTGAAGA AGGAAGTGAT GATGCCGCTG
AAGGATCTCA TCATCACGCC CGACATGCAC GAACGCAAGC GGCTGATGTT CGAGCACTCC
GACGCGTTCG TCGCCCTGCC GGGCGGGATC GGCACGCTCG AGGAGCTGGT GGAGCAGCTG
ACCTGGAAGC AGCTGGGACG CCATGCGAAG CCGGTGCTGA TGGCCAATAT CGACGGCTTC
TGGGAACCGC TGTTCGCGCT GCTCGCTCAC ATGCGCGAGA CCGAGTTCAT CCGCCCCGGC
TTCCAGATCG AGCTGCTCAA GGCCGAACGC GTCGAGGACA TCCTCCCCCG CTTGCGCGAA
GCGGCCGCCC GCGTCGCCAA GGAAGAGACG GAAATGGCGC CGGAGATCGC CAAGCGGCTC
TGA
 
Protein sequence
MTEIRTVCVY CGSGPGTNPS FIESAKALGK AFAESGVRLV YGGGSVGMMG AVAKAVLDHG 
GEVTGIIPDF LVKKEVMMPL KDLIITPDMH ERKRLMFEHS DAFVALPGGI GTLEELVEQL
TWKQLGRHAK PVLMANIDGF WEPLFALLAH MRETEFIRPG FQIELLKAER VEDILPRLRE
AAARVAKEET EMAPEIAKRL