| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3468 |
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| Symbol | |
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| ID | 5155217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3619131 |
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| End bp | 3620702 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558320 |
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| Product | putative outer membrane lipoprotein (NodT-like), RND efflux system |
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| Protein accession | YP_001239467 |
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| Protein GI | 148254882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0852484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.994499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAGC TTCATCCACT CTCGCGGTCT GTCCGGCGTG CCTCAAGGGC TTGGCTTGCC
CTGGCGCTCT TGATCGCGAC AAGCGGCTGC GCCGTCGGTC CTGATTTCGA TAGGCCCGAG
CCGCCTGCGG TCGCAGGCTA TACACGAAAG CCATTGGCCT CGCCTGCGGC GGACCGCACC
GGTCCGCAGG TTGCGCCGCA ACAATTCCAG ATTGACGCTG ACGTGCCGGC GCGCTGGTGG
GCGGCGTTCC GCTCGTTCCC GCTGAACGAG TTGATCCGCA GATCAGTCGC GCGCAACCCG
ACTCTCGACG CCGCCGACGC CGCGATCCGC ATCGCCAACG AGAATGCGCA GGCACAGCGC
GGGCTGTTCT ATCCGCAGCT CGGCGCGAAC TATACGGCCG CGGACCAGCA GAGCTCGAAC
ATGGCGAGGC AGCAGGGGCC GGGTGATCCG CCACAGTCGC GCTACTCTCT CCACACGGCG
CAGCTGACCA TCAGCTTCGT GCCGGACCTT TGGGGACAGA ACGCGCGCAG CGTCGAAAGC
CTGGAGGCGC AGACCGAGCA GGCGCGCTTC CAGCTCGAGG CGGCCTATCT GACGCTGACG
ACGAACGTCG TCACGGCCGC CATCCAGGAG GCCTCGCTGC GCGGCCAGAT CGCAGCGACC
GAGCGCATCA TCAAGATCGA GCGTGACATT CTCGGCATTC TCAACAGCCA ATTGCAGGCC
GGTCAGGCCG CGCAGGTCGA CGTGCTGACG CAACAGACCG CGCTGGCCCA AGTCGAGCAG
ACGCTGCCGC CACTGCAGAA GCAGATCGCG ATCCAGCGCG ACCTGCTGAC CGCGCTCGCC
GGTCAATTCT CGGCTGACGA GATCACTGAG ACATTCGACC TGCAGCATCT CGCTTTGCCG
CGCAACCTGC CGATCAGCCT GCCGGCTGCG CTGGTGGCGC AGCGGCCCGA CATCCGCGCC
GCCCAAGCTA ATTTGCATGC GGCCAGCGCG CTGGTTGGCG TGGCCATCGC CGCCCGGCTG
CCCAACATCA CGCTCTCAGC CAATCCCGGC AGCAGCGCCT TCAGGCCCGC CGAGTTGCTC
ACGCCGGGCA CGCTGTTCTA CACCGTCGCC GGCAGCGCCA CCGCGACCGT GTTCGACGGC
CTCACGCTCT ATCACCGGCA GAAATCCGCG GAGGCAGCCC TCGACCAGGC CGGCGCGCTG
TACCGCCAGG CCGTGATCAC CGCGCTGCAG AACGTCGCCG ACAGCCTGCG CAGCCTGCAG
GCCGACGCCC GCGCGGTGCA GGCGGCGATC AAGGCCGAAG ACAGCGCCCG CGCGACCCTC
GACATCATTC AGAAGCAGCT GACCCTGGGC CAGATCAGCC AGGTCACCGT CCTCAACGCC
CAGCAGGCCT ACCTCAACAC GGCCATCGCA CGCGTCCAGG CGGAGGCGAC CCGGCTTGCT
GATACCGCCG CCTTGTTCAT GGCGCTCGGC GGCGGCTGGC CTGCCGCCTG CACCACGCAT
GTGTGGCGCG ACTGCATCAT GAGCGAGGGC CGGGTCGATG TCCTGCGAAC GGCCGACGCC
GCACCGAAGT GA
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| Protein sequence | MRQLHPLSRS VRRASRAWLA LALLIATSGC AVGPDFDRPE PPAVAGYTRK PLASPAADRT
GPQVAPQQFQ IDADVPARWW AAFRSFPLNE LIRRSVARNP TLDAADAAIR IANENAQAQR
GLFYPQLGAN YTAADQQSSN MARQQGPGDP PQSRYSLHTA QLTISFVPDL WGQNARSVES
LEAQTEQARF QLEAAYLTLT TNVVTAAIQE ASLRGQIAAT ERIIKIERDI LGILNSQLQA
GQAAQVDVLT QQTALAQVEQ TLPPLQKQIA IQRDLLTALA GQFSADEITE TFDLQHLALP
RNLPISLPAA LVAQRPDIRA AQANLHAASA LVGVAIAARL PNITLSANPG SSAFRPAELL
TPGTLFYTVA GSATATVFDG LTLYHRQKSA EAALDQAGAL YRQAVITALQ NVADSLRSLQ
ADARAVQAAI KAEDSARATL DIIQKQLTLG QISQVTVLNA QQAYLNTAIA RVQAEATRLA
DTAALFMALG GGWPAACTTH VWRDCIMSEG RVDVLRTADA APK
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