| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3453 |
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| Symbol | |
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| ID | 5155957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3599992 |
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| End bp | 3601308 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558305 |
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| Product | putative tolC outer membrane protein |
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| Protein accession | YP_001239452 |
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| Protein GI | 148254867 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.341393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGCGG AGACGCTGCC GGAAGCCCTG GTCAGAGCCT ATCAGTCGAG TCCGCAGCTC
AACGCCGACC GTGCCCGCCA GCGCGGCACG GACGAAAACG TACCACAGGC GCTCGCCGGC
TATCGTCCTC AGATCATCGC TAGCCTCAGC GCGGGCCTGC AGGCGGTCAG GAATACGCTG
CCTGACAATA CGGTGCAGGG CACGACGCTC CGCCCCTGGA CGATCGGATT GACCGTCAAC
CAGGTTCTGT TCAACGGTTT CAAGACCGCC AATAGCGTCC GCGTCGCCGA ATTCCAGGTT
CTGTCGGGTC GCGAAGCCCT GCGCAACACG GGGCAGGGTG TGCTGCTCGA CGCCGTCACC
GTCTACATGA ACGTGCTGGC CAATCAGGCG CTCGTCGAAG CGCAGCGGAC CAATGTGACC
GTTCTCCGGG AGATACAGGA GACGACGCGC AGGCGCCTGG ACGCAGGCGA CGTCACGCCG
ACCGATACGG CGCAGGCCGA GGCGCGGCTG AGCCGCGGGC TTGCCGACCT TAACGCAGCC
GAGGTGACCC TCGCGATCAG CAAGGCCACT TATGCCCAGG TGACCGGGGA GGCGCCGGGC
CCGCTCGCTC CGGCTACACC CGTGGACCGG TTTTCTCCGC TGACGATGCA GGCCTCGGTC
GAGACCGCAA GGCATGAGCA TCCCGCCGTG CTCGGAGCGG CTTATGACGT CGATACTGCT
CAGACGACCA TCAGGGTCGC CGAGGGCAGC TTGCTGCCCA CTGTGGCGGT ACAGGCGAAT
GTCAGCCGAT CCAGGGATTC AGACACGACG CTCGGCACGT CAGGCACTGA CCAGGCTTCG
ATCGTGGGTC AAATCAATGT GCCGATCTAC GACGGCGGCA CTGCGGCGTC CCAGACCCGC
CAGGCCAAGG AGATGGCCTC GCAAAGCCGG CTGGTGCTCG AGCAGGTCAG GAATCAATCG
CGTACGGCGG TGGTCGGTGC CTGGGTCTCG AACGAAGGCG CCAAGGTCGC GCTGAGCGCG
GCCGAATCGG AGGTGAAGGC GGCGGAGATC GCCCTGCAGG GCGTCCGGCG CGAAGCCGCC
GGGGGGCAGC GCACGACAAT CGATGTGCTG AACGCGCAGC AGGAGCTCAC CAATGCTCGC
TCACGGCAGA TCGCGGCCCA GCGCGACCGC GTGATCGCAT CCTACACCCT GCTCAGTGCC
GTCGGTCGCC TCGATGTCCA CACTCTCGGC CTGAACACGC CGGACTATCT GCCCGAATTG
CACTACCATC AGGTTCGTGA TGCTTGGCAC GGTCTGCGCA CGCCGTCAGG TCAATAG
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| Protein sequence | MSAETLPEAL VRAYQSSPQL NADRARQRGT DENVPQALAG YRPQIIASLS AGLQAVRNTL
PDNTVQGTTL RPWTIGLTVN QVLFNGFKTA NSVRVAEFQV LSGREALRNT GQGVLLDAVT
VYMNVLANQA LVEAQRTNVT VLREIQETTR RRLDAGDVTP TDTAQAEARL SRGLADLNAA
EVTLAISKAT YAQVTGEAPG PLAPATPVDR FSPLTMQASV ETARHEHPAV LGAAYDVDTA
QTTIRVAEGS LLPTVAVQAN VSRSRDSDTT LGTSGTDQAS IVGQINVPIY DGGTAASQTR
QAKEMASQSR LVLEQVRNQS RTAVVGAWVS NEGAKVALSA AESEVKAAEI ALQGVRREAA
GGQRTTIDVL NAQQELTNAR SRQIAAQRDR VIASYTLLSA VGRLDVHTLG LNTPDYLPEL
HYHQVRDAWH GLRTPSGQ
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