Gene BBta_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3420 
Symbol 
ID5152415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3568430 
End bp3569023 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content63% 
IMG OID640558273 
Productcytochrome b561 family protein 
Protein accessionYP_001239420 
Protein GI148254835 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00251628 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGA TCAACTCGGC AAAAGGCTAC GGCGCGGTTC CTCAGGCGTT GCATTGGCTG 
ACGGCGCTCC TTGTTGCAAT CACCTGGGCG CTCGGCGTTC TCGGCGAGGA TCTGCCGAGT
GGCGGAGCGC GCGCGTCCGC CCTGTTCATT CATATTGCGG CGGGCATCGC AATCCTGGCG
ATGCTCGCAG TGCGGTTGAC GTGGCGGTTG GTCGACCCGG CGCCACCGAC CGAAGAGACC
GAATTCGCCA CATGGATGGG AAAATGGCAG GATCCGGCCG CCCGGTTCGC GCACTATCTC
CTGTACGCCC TCCTCTTCGC CGTGCCCGTC GCTGGGATCG TCCTGCAATT TGCGCGCGGT
GACGCGCTGC CGGTCTTTGG AATGACGGAG ATTGCATCGC CCTGGCCCAG GGATCGCGCC
TTCGCCCACA ATGTGAAGGA GGTGCATGAG ATCCTTGCTC ATGCCCTCGT TGTCGTTGCC
GCGATGCATG CGGCCGCGGC CCTGATCCAT CATTGGATCT TCCGCGATCG TACCTTGCTT
CGAATGCTGC CGCACTTCTG GAAGCCGTCG AGCACGCCTG GTGCAGGGGA ATGA
 
Protein sequence
MQLINSAKGY GAVPQALHWL TALLVAITWA LGVLGEDLPS GGARASALFI HIAAGIAILA 
MLAVRLTWRL VDPAPPTEET EFATWMGKWQ DPAARFAHYL LYALLFAVPV AGIVLQFARG
DALPVFGMTE IASPWPRDRA FAHNVKEVHE ILAHALVVVA AMHAAAALIH HWIFRDRTLL
RMLPHFWKPS STPGAGE