| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3356 |
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| Symbol | |
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| ID | 5154267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3511046 |
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| End bp | 3513046 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558215 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001239362 |
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| Protein GI | 148254777 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.456046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGCA CGCGAATCCT CTGGGGGCAG ATCACAGCGG TCGTCACGAT CGTGCTTGTC
ACGATGTGGG CCGCGACGCA GTGGACGGCG TGGCGGCTGG GGTATCAACC GCAGCTTGGG
CAGCCCTGGT TCGAGCTGGC GTGGGGTATG CCGATTTATT TCCCGCCTTC GTTTTTATGG
TGGTGGTTTG CGTATGACGC CTATGCGCCC GAGGTGTTCG CCGAGGGAGG TCTGATTGCG
GCGTTCGGCG GTGTGGCCTC GATCGCGGTT GCGTTCGGCA TGTCGGTGTG GCGGGCGCGT
GAGCCCGCCG ATGTCGTCAC CTACGGGTCC GCGCGATGGG CGACGCTGAA GGAGATCTCC
GCTGCCGGGC TGCAGGGGCC GGACGGCGTG GTGCTGGGAC GGTACGCGGA TCAGTACCTT
CGTCATGACG GTCCGGAGCA TGTGCTGTGT TTCGCGCCGA CCCGCTCGGG CAAGGGCGTT
GGCCTGGTAG TGCCGACCCT GCTGACGTGG TCGGGTAGTT GCATCGTGCA CGACATCAAG
GGCGAGAACT GGCAACTGAC GGCGGGCTTT CGAGCGCCGC ATGGCCGGGT GCTGCTGTTC
GATCCGACCA ATGCGCGATC GGCGGCCTAC AATCCGCTGC TCGAGGTGAG GCGAGGGGAG
TGGGAGGTCC GCGACGTCCA GAATGTCGCC GACGTCCTGG TCGATCCTGA AGGGTCGCTG
GAGCGGCGCA ATCATTGGGA GAAGACGAGC CACGCACTAC TGGTCGGGGC CATTCTCCAT
GTGCTTTACG CGGAAGCTGA CAAGACGCTG GCGGGGGTCG CCAACTTCCT CTCCGATCCA
AAGCGGCCGA TCGATGTCAC TCTGCGCGCG ATGATGACCA CGGCGCATCT GGGGGACGCC
GGGCCGCACC CTGTGATCGC ATCCGCCGCC CGCGAGCTCC TGAACAAGAG CGAAAACGAA
CGCTCGGGCG TGCTCTCGAC CGCGATGTCG TTTCTCGGTT TGTATCGAGA TCCGGTGGTA
GCGCAGGTGA CGCGCCGTTG CGACTGGCGG ATCCGTGATC TCGTCGCTGG CGAGCATCCG
ACCACGCTCT ATCTCGTGGT GCCGCCCTCC GACATCAGCC GGACCAAGCC GCTGGTGCGG
CTGATCCTCA ACCAGATCGG CCGCCGACTG ACCGAGGATC TGCAGGCCCA CGGGCGGCGC
CACCGGCTGC TTCTGATGCT CGACGAATTC CCGGCACTCG GCCGGCTCGA CTTCTTCGAG
TCCGCGCTCG CCTTCATGGC TGGTTACGGC CTCAAGAGCT TCTTGATCGC GCAATCGCTC
AATCAGATCG AGAAGGCCTA CGGGGCCAAT AACGCCATCC TCGACAATTG TCATGTGCGG
GTGTCGTTTG CGACCAATGA CGAGCGTACC GCCAAGCGTG TGTCGGACGC GCTGGGGACC
GCCACCGAGA TGCGGGCGAT GAAGAACTAT GCCGGCCATC GACTGAGCCC TTGGCTGGGA
CATCTCATGG TGTCACGCCA GGAGACGGCG CGTCCCTTGC TCACGCCGGG AGAGGTGATG
CAGCTGCCGG CTGATGATGA GTTGGTGCTG GTCTCCGGTG TTCCGCCGAT CCGCGGCAAG
AAGGCCCGGT ATTTCGCAGA TCCGCGGCTG GTCGATCGGG TGTTGCCACC TCCCAATCCG
GTTTTGACGG ATCAGGACGG CGACGCAGCA GCGGATGATT GGAGCAGGCT GCCGCCGATC
GCTCGGACTA TCGCAGCAAA AGAGCAGGGG AGGCCGGCTG CGCTGGATGC AGCCGGTGAC
GCCGCGAATG CCGGGATCCG GAGGGAGCCC GAGCTTCCCG AGCATGAGGA GATCGTGCCG
GAGCCGTCGC GGCCCGCGCA GGAGTTCAAC TTTGACAGAG AAGTGGATGA CGAGATGGTG
CGCAACAGCG TGCTCCGTGA CCAGCTTCGC GGCTTGCCGC GCCAGGCGGC GCTGGACCCG
GACGATGGCC TTGGTCTGTA G
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| Protein sequence | MPGTRILWGQ ITAVVTIVLV TMWAATQWTA WRLGYQPQLG QPWFELAWGM PIYFPPSFLW
WWFAYDAYAP EVFAEGGLIA AFGGVASIAV AFGMSVWRAR EPADVVTYGS ARWATLKEIS
AAGLQGPDGV VLGRYADQYL RHDGPEHVLC FAPTRSGKGV GLVVPTLLTW SGSCIVHDIK
GENWQLTAGF RAPHGRVLLF DPTNARSAAY NPLLEVRRGE WEVRDVQNVA DVLVDPEGSL
ERRNHWEKTS HALLVGAILH VLYAEADKTL AGVANFLSDP KRPIDVTLRA MMTTAHLGDA
GPHPVIASAA RELLNKSENE RSGVLSTAMS FLGLYRDPVV AQVTRRCDWR IRDLVAGEHP
TTLYLVVPPS DISRTKPLVR LILNQIGRRL TEDLQAHGRR HRLLLMLDEF PALGRLDFFE
SALAFMAGYG LKSFLIAQSL NQIEKAYGAN NAILDNCHVR VSFATNDERT AKRVSDALGT
ATEMRAMKNY AGHRLSPWLG HLMVSRQETA RPLLTPGEVM QLPADDELVL VSGVPPIRGK
KARYFADPRL VDRVLPPPNP VLTDQDGDAA ADDWSRLPPI ARTIAAKEQG RPAALDAAGD
AANAGIRREP ELPEHEEIVP EPSRPAQEFN FDREVDDEMV RNSVLRDQLR GLPRQAALDP
DDGLGL
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