Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3330 |
Symbol | |
ID | 5155495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3485240 |
End bp | 3487114 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558190 |
Product | hypothetical protein |
Protein accession | YP_001239337 |
Protein GI | 148254752 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.619294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCTT CCACGGCGCG CAATCTTGTC GCCGCCGTCA GGCCGGCGCT TCGGATATCG GCGCGGTCCG TATGGTCCGA TCAGGTCTGG CATCTCGACG GTCATCGTCC TGGCAGCAAC CGCAGCGACT TCTCGCTCGA CTGGGGTTTT GTTCTTGCTG ACGACAGCCG GTTCAGTGAT CCGCGATGGG CTGACTGGCG AGAGGCGGCG AAGCTGTTCC TATGGAGTCT GAAGCTCGAT CCGCCTCCTG GGTACCGCAA CGCTCATGAA TCGACGATCG TCTCCGTCTT CAATAGGTTG CGGATGCTGA TCCGCTGGAT GGCGGCGCAG GGATATCGGT GCTTTGCCGA TCTCGACCGC GACGCCTGCG ACCGGTTCAT GACGGTGATG GCGCAGCGTC CGGGCCACAA GCCTGGCAGT ACGCTGAAGA GCACGACACT GGGAAACCAT GCCAATCTGC TGACGCGCCT TTATCTGCAG GGAGCAAAGT TCCCGGAGAT CGCAATCGCC GATCCATTCC CGGGGATCGC GCCGCCGTTC GTTCGCCGCG ACCGGGGGTG GCTGCCTTAT ACGCCGGACG CGATCGCCGT GCCCCTGGTC TCGGCGGCGC TGCGGCTGAT CGGGACGCCG GCCGACGACG TCATCGCTCT GCAGGCCCAG GCGCAGTCCG TCTATGACCA TGCGCTCGCT AACGGGATCA GCCAGACCAA GGCCGGCTTC ATCGTGACTG ACGCGATCGC GCCGTTCACC TTCGCGACAC TGCCTGGTGA GGAAACTGCC TGGCATGAAG CGCCCGTCAC CAGCACCAAG CAGGTGCGCA ATCTCGCCGA TCGCATTTAC GACGCCTGCT TTGTGGTGGT CAGCTATCTG GTCGGCGCCC GGATCTCGGA GATCCTCGGC CTTCAGGTCG GCTGCATCGA GCAGCATCCT GCCGACGACG GCAGCGAGAG CTTCGCCTAT CTCGTCGGGC GGATTTACAA GACGGCGCGT GGCATCGATG GCGAAGCCCA TCGCTGGGTT GCGCCGGCAC CCGTCGAGCG GGCTGTCGTA GTCATGGAGC GGCTGACCGC CCGTCTTCGG GCCCAAAGCG GACGAGACGA TCTCTTTCTG GCGATGGCTA GCAACGGCCT TATTGGTCCT GCGGCCCGCA TCAACCTCCC CGTCGGCTCC ACGATCATAA GGCGGCTGAA TGATCTGTTT GCGCTGTTCA TCGGCCTGCC GGACCACGAG GGCGAGCCCT GGCATCTGAA CACGCATCAG GGCCGCAAGA CGTTTGCCCG CTTCGTCGGC AAACGCGACC GGACCGGCCT GTATGCGCTT CAGGCCCACT TCGGTCATGT GACCCGGGCC ATGACTGATC GCGGCTACGT CGGGACCGAC TTCGCGCTCG ACGACCTGAT CGACCGGCAT GCCCGGGAAG AAACCCGCGC CGCTCTCGAA GAAGTGCTGA CGGCAACCGC CCTCGCGGGC AAGGGCGGAC GGATGATCGC CGCCCGCTCC CAGTTCCGCG GGCGCACGCG CGACGGCGAT GTCCAGGCCT ATGTCTCCTT CCTGATGGAG GAGACTGATC TGCGGCTCGG CGTCTGCGAT TGGGGCTATT GCGTCTACCG CGTCGAAACG GCTGCCTGCT TCGGCGATGA GAAAGGCCCC AACCCCGTTC TGAGGACCGA AAGTACGTGT CTCGCCTGCG CCAACTTCGC CGTCACCGCC AGGCACAGGC CTGTCTGGCA GGCCCGCCGC GATCGCAATA CGGATCTTCT CGGCCATCCC GGCCTGGACC CGGTCAGCCG GCAACTCGCC GAAACCCGGA TTGCCGAATG CGATCGCATC CTTGGTGAAC TCGACCATGC AAAGGATGTT CGCCATGGCG CGTAA
|
Protein sequence | MTASTARNLV AAVRPALRIS ARSVWSDQVW HLDGHRPGSN RSDFSLDWGF VLADDSRFSD PRWADWREAA KLFLWSLKLD PPPGYRNAHE STIVSVFNRL RMLIRWMAAQ GYRCFADLDR DACDRFMTVM AQRPGHKPGS TLKSTTLGNH ANLLTRLYLQ GAKFPEIAIA DPFPGIAPPF VRRDRGWLPY TPDAIAVPLV SAALRLIGTP ADDVIALQAQ AQSVYDHALA NGISQTKAGF IVTDAIAPFT FATLPGEETA WHEAPVTSTK QVRNLADRIY DACFVVVSYL VGARISEILG LQVGCIEQHP ADDGSESFAY LVGRIYKTAR GIDGEAHRWV APAPVERAVV VMERLTARLR AQSGRDDLFL AMASNGLIGP AARINLPVGS TIIRRLNDLF ALFIGLPDHE GEPWHLNTHQ GRKTFARFVG KRDRTGLYAL QAHFGHVTRA MTDRGYVGTD FALDDLIDRH AREETRAALE EVLTATALAG KGGRMIAARS QFRGRTRDGD VQAYVSFLME ETDLRLGVCD WGYCVYRVET AACFGDEKGP NPVLRTESTC LACANFAVTA RHRPVWQARR DRNTDLLGHP GLDPVSRQLA ETRIAECDRI LGELDHAKDV RHGA
|
| |