Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3328 |
Symbol | |
ID | 5155608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3482278 |
End bp | 3483435 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640558188 |
Product | putative transposase |
Protein accession | YP_001239335 |
Protein GI | 148254750 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGA TCATCAAGGC GGCGATGGGC TATGCCGCAA TCCCGGCAGG CTTTCCGATT CTGGTGTCGG AGCGGATGGC GATCATCGAG CCGGCGTTTG CCTGGCTGAT GGAGTTGGCG ACCATACCGG GCCGCAGCCA TGCGGCTGAA ACGATTCGGA CCTACGGCGA GCACCTGCAT GACTGGTTCG ACAGCCTGGA GCAATCCGGG CTCAATTGGC GCGGGGTCGG CGAGGCGGAG ATTGCGGCCT GGCGCAACCG CATGCTCTCA CAGCCGAGCC CGCATACGAA GCGGCCATAC GCGCGGTCGA CGGTGAATGA TCGGGTTCGC ACGGTCTGCC GGTTTTATGC CTGGGCGCAG GGACGCGGCT GGATCGAGGC CTTGCCGTTC CACTTTGTCG ACGTGCGGGT GGGCTCTGGT CGGCGACAAG CGTTCCTTGC GCATGTCGAT GCGCGTCCCG GTGTCGTGGC GGCAAACATC CTGACTGTTG CCGAGCATGA GCGCTTGCCG CGACCGTTGC GGGTCGATCA GTTGCGTCGG GTCTTCGCCC TGTTGGAGAT GCCCTACCGC CTGATGGCGG AATGGGCGCT GGCGACGGGA TTGCGGCGCA AGGAGCTTTG CGGCTTGGCT GTCTTCCAGG TCCCGGAGAC AGCACATCTT GATGACGAGG ATCATCCGCT AGTCGGCGTG CCCTTGACGA TCACCAAGGG CGACAAGCCT CGCACGATCT ACCCGCCGAT CCGCTTGGTT GACCGCACGC AGCGCTATAT CGACGAAGTG CGCACGCCGC AGGTACGGGC GTTGCGTCGC CAACGGTCAA ATTATCGGTC GCCATCGGCG CTCTTCCTCA ATCTTCAGGG GAATGCCGTC AGCAAGACGC GATTGACTGC GGTGTTTGCG GAAGCCTTCC GGGCTGCCGG TGTGGCGGGT TCATTGCATT GGTTGCGCCA TACCTTTGCG ATGACGATGC TGGTGCGATT ACAGCGACAG GCATCGATCA CGCCTGACCT CAATCCGCTG AAGATCGTCC AGGTCTTGCT GGGGCACAGT TCGATCCAGA GCACGGCGAT CTACCTGCGC TGCGTCGAGC TCAATGCCCG GGAACTCGCC GACAGCATCG ACTATCTCTA TGGCGAGTTG ATCCCCGATG GCCGGTAA
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Protein sequence | MARIIKAAMG YAAIPAGFPI LVSERMAIIE PAFAWLMELA TIPGRSHAAE TIRTYGEHLH DWFDSLEQSG LNWRGVGEAE IAAWRNRMLS QPSPHTKRPY ARSTVNDRVR TVCRFYAWAQ GRGWIEALPF HFVDVRVGSG RRQAFLAHVD ARPGVVAANI LTVAEHERLP RPLRVDQLRR VFALLEMPYR LMAEWALATG LRRKELCGLA VFQVPETAHL DDEDHPLVGV PLTITKGDKP RTIYPPIRLV DRTQRYIDEV RTPQVRALRR QRSNYRSPSA LFLNLQGNAV SKTRLTAVFA EAFRAAGVAG SLHWLRHTFA MTMLVRLQRQ ASITPDLNPL KIVQVLLGHS SIQSTAIYLR CVELNARELA DSIDYLYGEL IPDGR
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