Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3270 |
Symbol | |
ID | 5153847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3425339 |
End bp | 3426352 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558134 |
Product | putative TRAP-type C4-dicarboxylate transport system, periplasmic component |
Protein accession | YP_001239281 |
Protein GI | 148254696 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.243033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGG GGACGACGCG TCGGCAATTG ATCACGGCAG CTGCTGCTCT GCCTTTCACA TTCGCGATCT CGCGCTACGC GAAGGCGGCG GAGTTCACGA TGAAGCTCGC GACCGGGCAG GATCCGTCGC ATCCGGTCAA CAAGCGGGCG CGAGAGGCCG CCGACCGCAT CAAGGACGCC AGCGGCGGCC GCCTGGAGAT CAATCTCTAT CCGGCCAATC AGCTCGGATC GGATACGGAC TTGATCTCGC AGGTCCGGGT CGGCGCGGTC GACGCGATCA ATATCGCGAG CTCCGTGCTC GCTACGCGCG TGCCGCTCGC CGGCATCGTC AACACCGGCT TTGCCTTCTC CTCCTACGAT CAGGTGTGGA AGGCGATGGA CGGCAGCCTC GGAGATCATA TCCGCAAGGA CATCGAGAAG ACCGGCGCGA TCGCGCTCTC CAAGCCCTGG GACAATGGCT TCCGCCAGGT CACGTCCTCG ACCCGTGAGA TCAGGACACC GGACGATCTC AAGAGCTTCA AGATTCGCGT GCCGGCTGCG CCGATCCTGA CAAGCCTGTT CCAGGCCCTC GGCGCCGGTC CGACACCGAT CAATTTCAAC GAGGTCTACA CGTCGCTGCA GACCAAGGTG GTCGAGGGGC AGGAAAACCC GCTGCCGATC ATCGCCACCG CCAAGCTCTA CGAGGTCCAG AAATACTGCT CGCTCACCAG CCACGTCTGG GACGCCTATT GGATTCTCTG CAACCGCGCT GCGTTCACGC GGCTGCCCGC CGATCTGCAG GCGATCGTCA CGCGCGAGTT CAACGCATCG GCCGACGACG AGCGCGCCGA TATTGCCGCG CTGAGCCAGA GCCTGCGTGC CGACTTGGCC GCCAAGGGCT TCACCTTCGT CGATGTCGAC AAGACCGCGT TCCGTGCCGC GCTCGGCAAG AGCAGCTTCT ACAAGGATTG GCGCGGCAAG TTCGGCGAGG AGGCCTGGAC GATCCTGCAG TCGAATGTGG GAGAGCTCGG ATGA
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Protein sequence | MRKGTTRRQL ITAAAALPFT FAISRYAKAA EFTMKLATGQ DPSHPVNKRA REAADRIKDA SGGRLEINLY PANQLGSDTD LISQVRVGAV DAINIASSVL ATRVPLAGIV NTGFAFSSYD QVWKAMDGSL GDHIRKDIEK TGAIALSKPW DNGFRQVTSS TREIRTPDDL KSFKIRVPAA PILTSLFQAL GAGPTPINFN EVYTSLQTKV VEGQENPLPI IATAKLYEVQ KYCSLTSHVW DAYWILCNRA AFTRLPADLQ AIVTREFNAS ADDERADIAA LSQSLRADLA AKGFTFVDVD KTAFRAALGK SSFYKDWRGK FGEEAWTILQ SNVGELG
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