| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3255 |
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| Symbol | |
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| ID | 5153203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3409676 |
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| End bp | 3410917 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558120 |
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| Product | putative short chain dehydrogenase |
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| Protein accession | YP_001239267 |
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| Protein GI | 148254682 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.695501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.516031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACC CGATCGATCC TCCCCGGCGC AAGAACCCGT TGCTGCGGAC GCGGCTGCCG
GCGTCGCCGC CGCGGGCGCG CAGCCGAAAG TCGCATGGCT TCACGCGAGC GGCCGCCGAG
GGGCGCTTCA TGCTGCAACG GTGCGCCGCC TGCAACACCT TTGCCTATCC GGCGCGCGAC
GCCTGTCCGT CGTGCCTGTC GGCAGATCTG CCTTTCGTCG ATGCGCCGCG GCGCGGCACC
TTGCTGGCGG AGACGACGGC TCGCGTTCCG AGCGATGTCT ATTTCCGTGA GCGGGCGCCC
TGGCGGATCG GTCTGGTCAA GATGGATTGC GGACCGACGA TCGTCGCGCA TCTGCACGCC
GATTGTAGCG AAGGGGCGCC CGTTCGCATG TCGTTTCAGC TCGACAAGAG CGGTCAGGCG
GTCGCCTTTG CCCGGCCGGA GGAGGAGACT CCCAACATGG ACGATGACCG GCAGTGGCGG
GAAATGACGG CTGATCCCAA ATTCCGGCGC GTGCTCGTGA CCAACGGTCG CAGTGCCATC
GGATTGGAGA CGGTCACCGC ATTGCAGGCC GCCGGCGCGA AGACGGTGTT TGTCGGCGTT
GCCGAGCCGT GGCGCCCGTT TGCTGGCGAA CAACACCTCC GCAAGCTGGA TGGAATCGAG
ATCGTCGCGC TGGACGCCTC CGATGAGAAG TCGGTCGCCG ATCTCGCCGC GGATATCGGC
GGCAAGGTCG ACATCCTCAT CAACACGACC GAATATATCA GGCCCGGCGG CGTGCTCGAC
CGCAAGGGCA CCGCCATTGC CCGCGAGGAG ATCGACCACG CCTATCTCGG CTTCCTGAAT
CTGGCGCAGG GATTCGGGCC CGCGATGCGG ATGCGGGGCG CGGATGGCGT CAACAGCAGT
GCCGCCTGGG TCAACGTCTT GTCGGTCTAT GCCTTGGCCA ACTGGCCTGC TTACGGCGCC
TATTCGGCCT CACAAGCCGC CTGCCTGTCG CTGTCCCATT GCCTGCGTGC AGAGTTGCGT
CCCGGCGGCG TCAAGCTGAC GAACCTGTTC ACGGGCCCTG TCGATACCGA GTGGTTCCAG
ATGGTGCCGC CGCCGAAGGT CGCGCCCCGC GCCATTGCGC AGGCGATCGT GGCCGCGCTC
AAGAGCGGCC TCGAGGACGT CTATGTCGGA GACGTTGCAG AAGAAATCCG GCAGCGGCTC
GCCGCCAATC CGAAGGCGCT CGAGCGTGAG CTCGACCGAT GA
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| Protein sequence | MINPIDPPRR KNPLLRTRLP ASPPRARSRK SHGFTRAAAE GRFMLQRCAA CNTFAYPARD
ACPSCLSADL PFVDAPRRGT LLAETTARVP SDVYFRERAP WRIGLVKMDC GPTIVAHLHA
DCSEGAPVRM SFQLDKSGQA VAFARPEEET PNMDDDRQWR EMTADPKFRR VLVTNGRSAI
GLETVTALQA AGAKTVFVGV AEPWRPFAGE QHLRKLDGIE IVALDASDEK SVADLAADIG
GKVDILINTT EYIRPGGVLD RKGTAIAREE IDHAYLGFLN LAQGFGPAMR MRGADGVNSS
AAWVNVLSVY ALANWPAYGA YSASQAACLS LSHCLRAELR PGGVKLTNLF TGPVDTEWFQ
MVPPPKVAPR AIAQAIVAAL KSGLEDVYVG DVAEEIRQRL AANPKALERE LDR
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