| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3219 |
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| Symbol | ompR |
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| ID | 5152574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3371196 |
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| End bp | 3371921 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558085 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001239232 |
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| Protein GI | 148254647 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.699117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCC CCTCGGCCAC GCTTCTGATG GTGGAGGACG ATCCGGAGAT CAGCCGGCTC
GTGCGCGATT TCATGCGTCG GGAAGGCTTC GAGATCGAGG TCGCCGAGAA TGCCGCGGCC
ATGGACGCCG TGCTGCGGCG GCTGCGGCCC GATCTGATCA TTCTCGACCT GATGCTGCCG
GGCGAGGACG GGCTGTCGAT CTGCCGCCGC CTGCGTCAGA GCGACGACAT TCCGATCCTG
ATGCTGTCGG CGAAAAGCGA CGAGATCGAT CGGGTGGTCG GGCTGGAGCT CGGCGCCGAT
GACTACATGG TGAAACCGTT CGGACCGCGC GAGCTGCTCG CCCGCGTCCG CGCGCTGCTA
CGGCGGGCGC AGGCAAGTCC GCGGCGTGAG GCGAGCCGGC GCTTCGCCTT CGACCGGTTC
GTGCTCGACG TCGATGCGCG CAGCATCGAG ACCGTGAGCG GCGGCGATGC GCCGATACAG
CTGACCTCTG CGGAGTTCGA CCTGCTCGCC TGCTTCGTGC AGCGGCCCCG CCGCGTGCTC
AGCCGCGACC AGATCCTTGA TTTCACCCGC GGCCGCTCCG CCGAGCCGTT CGACCGTACC
GTGGACATGC TGATCTCGCG GTTGCGACGC AAGCTTGAGG CGGCAAGCCC CGGGACCAGC
CTGATCACCA CGGTCCGCAA TGGTGGCTAT CTGTTCACGG CCATCGTGAG GCCCGTCGCC
GGATGA
|
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| Protein sequence | MSIPSATLLM VEDDPEISRL VRDFMRREGF EIEVAENAAA MDAVLRRLRP DLIILDLMLP
GEDGLSICRR LRQSDDIPIL MLSAKSDEID RVVGLELGAD DYMVKPFGPR ELLARVRALL
RRAQASPRRE ASRRFAFDRF VLDVDARSIE TVSGGDAPIQ LTSAEFDLLA CFVQRPRRVL
SRDQILDFTR GRSAEPFDRT VDMLISRLRR KLEAASPGTS LITTVRNGGY LFTAIVRPVA
G
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