Gene BBta_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3201 
Symbol 
ID5151432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3351729 
End bp3352394 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID640558066 
Producthypothetical protein 
Protein accessionYP_001239219 
Protein GI148254634 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCC GACTGCTGCA GAACTTCAAG GGTGGCCGCG CGCTGGTGAT CACCCGGCGG 
GCAGGGTGGG AGACCACGCT GGAGACGACC CTCGCCAAGC TCGGCGTCGC CTGCGACTAT
CCCGAGATCG TCGACGGTCG CGCCCAGCTC GACGTCGGCG TCTTGCAGCC GGAGCGCGAC
ATCCTGTTCA TCGATGGCGA CCTCGAAGGC GCCGTCGCCA TCGAGGTCAA CCCGGCGTCG
AAACTGCCGC CCGTTCCGGT GATCGGGCTG GTCGGCGTGG AGGCGCCGAG CCGGCTCAAG
GCGCTGGTCA ATCTCGGCGC CACCTCGTTC CTGCGCAAGC CCGTGCATGG CGGCGCCGTC
TACACCGCGC TGTTCCTCGG CATCAACCAG TTCCTGCTGC GCACCGACAT GTATGAGAAG
CTGCAGGACC TCGAGAGCCG CCGGCGCGGC CGAAGGGCCG TGATCCGTGC CGTCGTGACC
CTGATGCAGG AGACAGGTCT CAACGACGAC GACGCCTATT CCGCGCTTCG CCGCGACAGC
ATGCGGGCGC GGCAAAGTCT GGAGCTCTAT TGCGAGGAGT TCCTGAAGAG ACGGGCGAGG
CCGCCCGATA CGCCGGAACG CCCGAGCAGC ATCACGCTGC AAGGCGTCAA CAAACAAGCG
ATGTAG
 
Protein sequence
MTFRLLQNFK GGRALVITRR AGWETTLETT LAKLGVACDY PEIVDGRAQL DVGVLQPERD 
ILFIDGDLEG AVAIEVNPAS KLPPVPVIGL VGVEAPSRLK ALVNLGATSF LRKPVHGGAV
YTALFLGINQ FLLRTDMYEK LQDLESRRRG RRAVIRAVVT LMQETGLNDD DAYSALRRDS
MRARQSLELY CEEFLKRRAR PPDTPERPSS ITLQGVNKQA M