| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3178 |
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| Symbol | |
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| ID | 5150926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3327418 |
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| End bp | 3328347 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558044 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_001239197 |
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| Protein GI | 148254612 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.805079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.212985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCG CCCTGCTCGG CGCCCTCGCC GCATCGCGCG CTGAAGCCGC AGAGACGCTG
CGCATCGGCT ATCAGAAATC CTCCACCTTG ATCGCCCTGC TCAAGACCAA TGGCGAGCTG
GAAAAGGCGC TGGCGCCGCT CGACATCAAG GTGTCCTGGC ACGAATTCTC CAGCGGCCTG
CCGCTGCTCG AGGCGATCAA CATCGGCAGC ATCGATGTCG GCGCTGATGT CGCCGACACC
GTGCCGGTGT TCGCGCAGGC CGCAGGCGCC AAGATCGCTT ACGTCGCCGA GGAGGCCGCC
TCCCCCTCCG CGCAGGCGAT CCTGGTGTCG ACCGCCTCGC CGATCAAGTC GCTGGCCGAA
CTCAAGGGCA GGAAGATCGC GGTGACCAAG GGCGCCGGCA GCCATTATCT GCTGCTCTCA
GCGCTCGCCA AAGCGGGGCT GACCTTCAAG GACATCACCC CGGCCTATCT GCCGCCCGCC
GACGGCCGCA CCGCCTTCGT CAGCAACAAT GTCGATGCCT GGGTGGCGTG GGATCCGTTC
CTGACCAGCA CCATCCGCCA ATCCGGCGCG CGCGTGCTCA CCGACGGCAG CGACGGGCTC
GCCAGCTACA AGCGCTATTA CCTCGCCTCG GCCGATTATG CCGCCAAGCG CGGCGACGTC
CTCAACATCA TCTATGGCAA GCTGGTCGAG ACCGGCAAAT GGGTCAAGGC CAATCCGGCC
GCAGCGGCGA ACCAGCTCGC CACGCTGTGG GGCATCGATG CGGCCACCGT CGAGGAGGCC
AACAGCCACC GCTCCTACCA GGTCGGCACA GTCACCGCAG CCGGCCTCTC CGAGCAGCAG
AAGATCGCCG ACGCATTTCT GGCCGAGCGC GTGCTGCCCG CGAAGGTGGA CACATCTGCG
TTAGCGATCT GGACTCCGAA GGCGCCGTGA
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| Protein sequence | MAVALLGALA ASRAEAAETL RIGYQKSSTL IALLKTNGEL EKALAPLDIK VSWHEFSSGL
PLLEAINIGS IDVGADVADT VPVFAQAAGA KIAYVAEEAA SPSAQAILVS TASPIKSLAE
LKGRKIAVTK GAGSHYLLLS ALAKAGLTFK DITPAYLPPA DGRTAFVSNN VDAWVAWDPF
LTSTIRQSGA RVLTDGSDGL ASYKRYYLAS ADYAAKRGDV LNIIYGKLVE TGKWVKANPA
AAANQLATLW GIDAATVEEA NSHRSYQVGT VTAAGLSEQQ KIADAFLAER VLPAKVDTSA
LAIWTPKAP
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