Gene BBta_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3175 
Symbol 
ID5150923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3324371 
End bp3325153 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID640558041 
Producthypothetical protein 
Protein accessionYP_001239194 
Protein GI148254609 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.567712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0913717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGT CGATCAACGA CCGCGACGTC TTCATTGCCA CCGGCGGCCG CGCTTTCGAG 
CCCGCTTTGC CTGCCGTGGT CTTCGTGCAT GGCGCAGGCT TCGATCATTC GGTCTGGGCG
CTGCATAGCC GCTGGTTCGC CCATCACGGC TTTGCGGTGC TGGTGCCCGA TCTGCCCGGC
CATGGCCGCT CCGCCGGGCC GGCGCTGCCG ACCATTGCCG CGATGGCCGA CTGGATCGAT
GCGCTGTTGC ACGCGGTGAA TGCCAGGCCT GCGCATCTGA TCGGCCATTC GATGGGCTCG
CTGATCGCGC TGGATGCGGC GGCACGCCAT CCGGAGCGCG TCTCGGCGCT CAGCCTGATC
GGCACCGCGG CCACCATGAC GGTCGGACCT GATCTCCTGA AGGCCGCGGA GGCCAATGAT
CACGCCGCCA TCGACATGGT CTCGATCTGG GGCCTCGGCT TTGCGGCCGA ACTCGGCGGC
AGCCGGGCGC CCGGGCTGTG GATGCATGGC AGCGCGCAGG CGACCCTGGA GCGCTGCGCG
CCCGGGGTCC TGTTCAACGA TCTCGCCGCC TGCAACACCT ATCAGGACGC TCTGACGTCG
GCAGCCAAGA TCAAGGTGCC GACTCGCCTC ATCCTCGGCG AGAAGGACAT GATGACGCCG
GTCAAGGCCG GCAAGGCGCT GGCCGCGGCG ATTGCACAAT CGCGCACGAT CGTGTTGCCC
GGTGCGGGAC ATACGATGAT GGCGGAATGC CCGGATGCGC TGCTCGATGC GTTGATCGAT
TAG
 
Protein sequence
MQLSINDRDV FIATGGRAFE PALPAVVFVH GAGFDHSVWA LHSRWFAHHG FAVLVPDLPG 
HGRSAGPALP TIAAMADWID ALLHAVNARP AHLIGHSMGS LIALDAAARH PERVSALSLI
GTAATMTVGP DLLKAAEAND HAAIDMVSIW GLGFAAELGG SRAPGLWMHG SAQATLERCA
PGVLFNDLAA CNTYQDALTS AAKIKVPTRL ILGEKDMMTP VKAGKALAAA IAQSRTIVLP
GAGHTMMAEC PDALLDALID