Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3133 |
Symbol | cobT |
ID | 5149525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3283258 |
End bp | 3284313 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640558000 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001239154 |
Protein GI | 148254569 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.380038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCCCTG ACTGGATCTC CCTCGATTGT GCCGCGCCGT CCGAGAGCCA TCGGCAGGCG GCCATGGCGC GCCAGGCGCA GCTGACCAAG CCGCTCGGTG CGCTTGGCCG GCTGGAGGAG GTGGCTGTCG AGCTGGCGGC GCTGCAGGCG ACGGACCACC CAGGTGCCGA CCGGGCGCCC GTCGTGCTGT TCGCCGGCGA TCACGGGATC GCGGCGCAGG GGGTCTCGGC CTATCCGCCG GAGGTCACAG TGCAGATGCT TCGCAACTTT GCCGGTGGAG GCGCGGCGAT TGCGGTGCTC GCGCGTCATC TCAACTGCCC GCTCGAGGTG GTCGACGTTG GCACGCTGGC GAGCGATGCC GTTCCCGGCG TGGTGGCCGA CAAGACGCGC CGCGGCACGC GCGACTTCAG TGTCGCGCAG GCGCTCACGC CGGAGGAGGT GGCCTTCGCC TGCGATGCCG GGCGCCGCGC GCTGGCGCGG CAGGCCGATC ATCAGCCGCA GCTCGTCATC TTCGGCGAGA TGGGGATCGG CAACACGACA TCAGCCGCCG CGATCGCCGC CGCGCTATTG TCCTGCGCGC CGGTCGACAT CGTCGGCAGC GGCACGGGTC TCGACGCCGA TGGGCGCGCC AAGAAGGCCG CCGTCATTGT CGCAGCCCTG GCGCGGCATG GACTGACATC GGACGCGGCG GTGGCGGATA TCCTGGCCGC CGTCGGCGGC TTCGAGATCA TCGCAATGGC CGGCGCCATG ATCGCTGCCG CGCAGCGGCG TTGGCCAGTG CTGGTCGATG GCTTCATCGT CTCGGTCGCG GCGCTCGCGG CGGTCAGGCT CAATCCGTCG TGCCGTACCT GGCTACTGTT CTCGCACCGC TCGGCCGAGC GCGGTCATGC GCTGGTGCTC GACGCGCTCG GCGCCCATCC GTTGATCGAT CTCGACCTCA GGCTCGGGGA GGCCTCCGGC GCCGCCACCG CGCTGCCGAT CATCCGGCTC GCCTGCGCGC TGCATAACGG CATGGCCACC TTCGCGGAGG CTGCCGTCTC GGGACGCGAC GCGTGA
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Protein sequence | MLPDWISLDC AAPSESHRQA AMARQAQLTK PLGALGRLEE VAVELAALQA TDHPGADRAP VVLFAGDHGI AAQGVSAYPP EVTVQMLRNF AGGGAAIAVL ARHLNCPLEV VDVGTLASDA VPGVVADKTR RGTRDFSVAQ ALTPEEVAFA CDAGRRALAR QADHQPQLVI FGEMGIGNTT SAAAIAAALL SCAPVDIVGS GTGLDADGRA KKAAVIVAAL ARHGLTSDAA VADILAAVGG FEIIAMAGAM IAAAQRRWPV LVDGFIVSVA ALAAVRLNPS CRTWLLFSHR SAERGHALVL DALGAHPLID LDLRLGEASG AATALPIIRL ACALHNGMAT FAEAAVSGRD A
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