Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3064 |
Symbol | |
ID | 5155971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3204919 |
End bp | 3205908 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640557935 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001239089 |
Protein GI | 148254504 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.515173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGG TCCAGTTCTC TGAGCTCTCC GCATTCGCGG CCGTCGCGGA TACGTTGAGC TTCACCAAGG CTGCAGCTCA GATCGGCTGC TCCTTGCCGA CCATCAGCCA TACAATCAAA AGCCTTGAGG AACGGTTGGA CGTCAGGCTG TTCAATCGTA CGACCCGCAG CGTGGCACTG ACCGAAGCCG GCGAGCGGCT GCTCGCAGAG ATCCAGCCGA TTTTCGAGCA GGTCGACCAG GCCATCGAGA GCATCAACGC GTTCCGCGAC AAGCCGGTCG GAACGCTGCG GATCGCGGTG CCCCGCGTGT TCGCAATCAG AGGGCTGGGC CCGCTGATCA GATCGTTCCT GGCCGAATAT CCGGACATCC AGCTCGAACT GGCGGTCGAC GACACGAACA GTGACATTGT GCGCAATCGA TTCGATGCCG GCATCCGATC CGGGCATCGC GTCGAGCGCG ACATGAAGGT GATCCGCGTA GTCGACGACC TGCAATTCGT CGCCGTCGCC TCTCCAGACT ATCTCGCCGT CCATCCGGCA CCGTCTTCTC CGGAAGATCT TGGCGCACAT AATTGCATCC GTCATCGCTT TCCCGCTGAT GAAACGTTGC AGCCCTGGGT GTTCGAGCAA GGTGAGCAAC GGGCCGAGAT CGCCGTGGAC GGCTCGCTGA TCGTCAACGA TTTCGACCTG GCCCTGAATG CCGCGCTCGA TGGCGTCGGC ATCGCCTATC TGGTCGAGCC GTTGGTCGAC GCACATCTGG CGGAAGGACG ATTGGTCCGC GTGCTGCCGG ATTGGAGCAG TGCAACGCCC GGGTTGTTTC TCTATCACCC GAGCCGGCGG CAACCGCCGA TGCCGCTGCA GGTCTTTCTC GACTTCGTCA AGCGATGGCG TATCCGTGCG ACGATCGCTC CGATGACGCG CGCCTCGGAT GGCGGCCGAA GCGCGCTGGT TGCGGCCACG CCCCACCGAT CCGCGCTCCC TATCGATTAG
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Protein sequence | MARVQFSELS AFAAVADTLS FTKAAAQIGC SLPTISHTIK SLEERLDVRL FNRTTRSVAL TEAGERLLAE IQPIFEQVDQ AIESINAFRD KPVGTLRIAV PRVFAIRGLG PLIRSFLAEY PDIQLELAVD DTNSDIVRNR FDAGIRSGHR VERDMKVIRV VDDLQFVAVA SPDYLAVHPA PSSPEDLGAH NCIRHRFPAD ETLQPWVFEQ GEQRAEIAVD GSLIVNDFDL ALNAALDGVG IAYLVEPLVD AHLAEGRLVR VLPDWSSATP GLFLYHPSRR QPPMPLQVFL DFVKRWRIRA TIAPMTRASD GGRSALVAAT PHRSALPID
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