Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3060 |
Symbol | |
ID | 5149441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3196717 |
End bp | 3198840 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640557931 |
Product | putative outer membrane protein and related peptidoglycan-associated (lipo)proteins |
Protein accession | YP_001239085 |
Protein GI | 148254500 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAC CATCGAAATG GTGGCCAGGC CTGATCGCTA TCGCCGTGCT GTGGCTGGTT GCGATCGCCT TCAAGACCGC CGGGGTGGAA GACGAGATCG CACCGCGCGC CCGCGCCGCC GTCGCGTCCG CCGCCCCCGA TACCGTCGCA GCATTGAAGG TCTCGGTCGC CGGCCGTGAC GTTCGCATCG AAGGGCCGGA GTTCAGTCCA GAGCAGGCGG ACCGGCTGGA CGACGCCGCA GCCGTGAATG GCGTCCGGCT CGTCGTCGGC AATTACGACA AGCTGCCGAC GCCCAAGCCC TACGCATTCC GCGCCGCGCG CGATGGCAAC CAGCTGGTGC TCGAGGGCGG CGTGCCGACC CCCGCGGTCC GCGAGGCCCT CATCAAAACC GCGCGCGCCG CCCTCGGCAG CGGCGCGGTG GTCGACCACC TCGGCTATGC CCTGGGTGCC CCCGCCGACT TCGCGGCGAT CGCCAGCCAT GGACTGACGC AGGCCGGCAA GCTCAATGGC GGCACCTTTG CGCTTGCGGA CAAGGCCTAT TCGATCGCCG GTGCGGCGAC ATCGTCCGAC ATCTATGAGG CGGCCGTCGC TGCGATGCGC CAGTTGCCGG GCGGCGCCGT GCTCGACAAG GTGTCGATCC TGCCGCCCGA GGCCAAGCCG TTCATCTGGA GCGCGGTCCG CGAGGGTCAA TCGGTCGTGA TGTCCGGCGT GGTACCGAAC GACGCGATCA GGCGCGCGCT CGAGGCTGCC GCGGCCAAGG CCTGGCCCGG CGCGTCGGTG ATGCATCATA TGCAGATCGC ACGCGGCGCG CCGTCCGGCG ATTTCAGTGC GTACACGACT TATGCCCTGG CCGAGCTGTC CCGGCTGAGT ACCGGACGTG TCGTCATCTC CGATGCCAAC TACACGATCG CTGGCGAGGT CCCCTCGCCC GCCGCGTATG ACGAGGCCAT GGCCGGCGTC GGCAAGCTGC CGAGCGGACT GACGCTTGCC AAGGCCGACA TTGTGCCGCC TGAGATCAAG CCCTATCGCC TGTCGGCGGA GCTCGGCCCG ACCGGCCTCA CCCTGACCGG CCTTGCGCCC AGCACGTCCG TTCGCGACGC GATCACAGCC GCGGCGAATG GACAATTCGC AGGCAGAACG GTCACGGCCA AGATCGGCAT CGCGCGCGGC GCGCCCGAGG GCGACATCGC CAAAGCGAGC GTGAGCCTGC TGACGGAGCT CGGCAAGCTG GCCCAGGGCC GCGCCGAAAT CAACGACGCG CAGATTTCGC TCAGCGGCGT CGGACTGGCC AACGTCACCG GCGCGGCGGT GCGGCAGTCG CTCGCCGGCG CGCTCGCCGC GCCGTTTGCG GTCGCGGCGG TCGACGTGCG CGACGGTCCG GTGTCGCCTT ACGCGTTCGA ACTGCAGAAG CAGGACGGCC GCGTCCGATT GAGCGGCTAC GTCCCTGACG ACGCGGCACG GCGCGATCTC GTCGAGGCCG CCAGCGCGGC CTTCGTCACG GACACGGTCG AGGACGGCCT GAAAACCGCT GACGGTGCGC CGAAGGCGTT CGTCACGTCG CTCAAGGCGA CGTTCCCGGC GCTGGCGCGG CTGTGGTCGA CCAAGCTCGC CGCGAAAGAC GCTGACATCA CGATCGAGGG CGAGGCCATC TACGACAAGT CGGCCGAGCA GGTCCGCAAG GAGCTCACCG ACGCAGCCGG CGGTGACGTC AAGCTCGCGG ACGTCAGGAT CGGCCTCAAG CCGGAGAGCC CGCCACTGCC CACCGAGGCC TGCCAGCCGG CCTTCAACGG GCTGCTCGCC AAGGGCCGGA TCCGCTTCGA TACCGGCAGC GCCGAGCTCA GCCGCGAGTC GCTGGCGCTG CTCGACCACA TCGTCGTCGT GGCGCAGCGC TGCAAGGACG CCGAGATCGT GATCGAAGGC CATACTGACA ATGTCGGCGA CGAGGAGGAC AATATGGACC TCTCGAAGCG GCGGGCGGTG GCCGTGGTCG GCTACATCGG CGAGGCCGGC ATCGACACCT CGCGCATGAC CTCGGCGGGC TACGGCCAGA CCCGGCCGAT CGCCTCCAAC GACACCGCGG AAGGCCGGGC GCAAAACCGC CGCATCGAAT TCGTCGTGAA GTGA
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Protein sequence | MHQPSKWWPG LIAIAVLWLV AIAFKTAGVE DEIAPRARAA VASAAPDTVA ALKVSVAGRD VRIEGPEFSP EQADRLDDAA AVNGVRLVVG NYDKLPTPKP YAFRAARDGN QLVLEGGVPT PAVREALIKT ARAALGSGAV VDHLGYALGA PADFAAIASH GLTQAGKLNG GTFALADKAY SIAGAATSSD IYEAAVAAMR QLPGGAVLDK VSILPPEAKP FIWSAVREGQ SVVMSGVVPN DAIRRALEAA AAKAWPGASV MHHMQIARGA PSGDFSAYTT YALAELSRLS TGRVVISDAN YTIAGEVPSP AAYDEAMAGV GKLPSGLTLA KADIVPPEIK PYRLSAELGP TGLTLTGLAP STSVRDAITA AANGQFAGRT VTAKIGIARG APEGDIAKAS VSLLTELGKL AQGRAEINDA QISLSGVGLA NVTGAAVRQS LAGALAAPFA VAAVDVRDGP VSPYAFELQK QDGRVRLSGY VPDDAARRDL VEAASAAFVT DTVEDGLKTA DGAPKAFVTS LKATFPALAR LWSTKLAAKD ADITIEGEAI YDKSAEQVRK ELTDAAGGDV KLADVRIGLK PESPPLPTEA CQPAFNGLLA KGRIRFDTGS AELSRESLAL LDHIVVVAQR CKDAEIVIEG HTDNVGDEED NMDLSKRRAV AVVGYIGEAG IDTSRMTSAG YGQTRPIASN DTAEGRAQNR RIEFVVK
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