| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3011 |
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| Symbol | |
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| ID | 5152643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3147629 |
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| End bp | 3148198 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640557885 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001239039 |
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| Protein GI | 148254454 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.307817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGCGTGA CAGCGGCGGC GTCGGATGAA GCCCTGATGG CCAGGATCGC CCAAGGCGAT
CGGCTCGCCA TGCAGGTGCT GTATGGCCGG CACCATGTCA GGGTGTACCG TTTCGGGCTC
CGGCTCGTAC GGGACGAACA GGTGGCGGAA GACCTCATCA GCGAGGTCTT CCTGGATGTG
TGGCGTCAGG CCGGCAAGTT CGAGGGCCGT TCTGCCGTCT CGACATGGCT GCTGGCGATC
ACGAGATTCA AGGCGCTGTC GGCACTTCGG CGCCGCAAGG ACGTTGAGCT GGAAGACGAG
GCCGCGAACG CGATCGAGGA TACGTCCGAT GATCCGGAAA TCGCGGTCCA GAAGAAGAAT
ACCGGGGAAG CCCTGCGCAA GTGCCTGACC GCGCTTTCGC CTGACCACCG GGAGATCGTC
GATCTCGTCT ACTACCACGA GAAGTCCGTG GAGGAGGTGG CCGAGATCGT CGGAATTCCG
GAGAATACCG TCAAGACGCG CCTGTTCTAT GCGCGCAAGA AATTGGCCGA ACTCCTGAAG
GCGGCCGGCA TTGAGCGAGG CTGGCCATGA
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| Protein sequence | MSVTAAASDE ALMARIAQGD RLAMQVLYGR HHVRVYRFGL RLVRDEQVAE DLISEVFLDV
WRQAGKFEGR SAVSTWLLAI TRFKALSALR RRKDVELEDE AANAIEDTSD DPEIAVQKKN
TGEALRKCLT ALSPDHREIV DLVYYHEKSV EEVAEIVGIP ENTVKTRLFY ARKKLAELLK
AAGIERGWP
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